RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 TMEM207Q6UWW9 146 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 PAQR9Q6ZVX9 377 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 TOMM40LQ969M1 308 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 OR7D2Q96RA2 312 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 SEC22CQ9BRL7 303 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 MED18Q9BUE0 208 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 SLC25A31Q9H0C2 315 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 EFCAB7A8K855 629 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 PPP1R2P9O14990 202 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 ATG12O94817 140 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 NNATQ16517 81 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 OR1M1Q8NGA1 313 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 LMF2Q9BU23 707 aaKnown RBP18.33■□□□□ 0.52
SHANK1-203ENST00000391813 MARCH5Q9NX47 278 aa18.33■□□□□ 0.52
SHANK1-203ENST00000391813 ZNF443Q9Y2A4 671 aaPredicted RBP18.33■□□□□ 0.52
SHANK1-203ENST00000391813 ZAR1LA6NP61 321 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 DVL2O14641 736 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 UBL4AP11441 157 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 TLE3Q04726 772 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 SGCAQ16586 387 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 AANATQ16613 207 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 XAF1Q6GPH4 301 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 OR56B2PQ8NGI1 322 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 OR5D14Q8NGL3 314 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 ASB17Q8WXJ9 295 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 MMABQ96EY8 250 aaPredicted RBP18.32■□□□□ 0.52
SHANK1-203ENST00000391813 FZD3Q9NPG1 666 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 DNMT3BQ9UBC3 853 aaKnown RBP18.32■□□□□ 0.52
SHANK1-203ENST00000391813 ZNF337Q9Y3M9 751 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 ZNF175Q9Y473 711 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 KPTNQ9Y664 436 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 CITO14578 2027 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 A0A0B4J2A0 478 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 AKR7A2O43488 359 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 OR2F2O95006 317 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 CD53P19397 219 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 RGRP47804 291 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 HOXC5Q00444 222 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 PLCXD2Q0VAA5 305 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 OR2F1Q13607 317 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 HSF5Q4G112 596 aaPredicted RBP18.32■□□□□ 0.52
SHANK1-203ENST00000391813 FAHD1Q6P587 224 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 NAXEQ8NCW5 288 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 DAZLQ92904 295 aaKnown RBP18.32■□□□□ 0.52
SHANK1-203ENST00000391813 ZNF385DQ9H6B1 395 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 SHPKQ9UHJ6 478 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 ZNF223Q9UK11 482 aaPredicted RBP18.32■□□□□ 0.52
SHANK1-203ENST00000391813 TMEM212A6NML5 194 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 AGAP14A8MT82 685 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 CRTAPO75718 401 aaPredicted RBP18.32■□□□□ 0.52
SHANK1-203ENST00000391813 ELK1P19419 428 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 AKR1C2P52895 323 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 LILRB2Q8N423 598 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 OR10Z1Q8NGY1 313 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 NICN1Q9BSH3 213 aa18.32■□□□□ 0.52
SHANK1-203ENST00000391813 A6NIZ1 184 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 ACOD1A6NK06 481 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 NAT1P18440 290 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 SLC19A1P41440 591 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 CLDN6P56747 220 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 RAP1BP61224 184 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 RAP1AP62834 184 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 TNFRSF17Q02223 184 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 OR1Q1Q15612 314 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 SGCBQ16585 318 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 SLC43A2Q8N370 569 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 OR51T1Q8NGJ9 327 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 SEC22AQ96IW7 307 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 CPEB1Q9BZB8 566 aaKnown RBP18.31■□□□□ 0.52
SHANK1-203ENST00000391813 AKAP11Q9UKA4 1901 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 TARM1B6A8C7 271 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 SERPINA5P05154 406 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 ITGB7P26010 798 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 PER3P56645 1201 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 EIF2B1Q14232 305 aaKnown RBP18.31■□□□□ 0.52
SHANK1-203ENST00000391813 TEX261Q6UWH6 196 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 VRK2Q86Y07 508 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 MFSD4AQ8N468 514 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 C12orf57Q99622 126 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 KATNB1Q9BVA0 655 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 ACER3Q9NUN7 267 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 RPH3AQ9Y2J0 694 aaPredicted RBP18.31■□□□□ 0.52
SHANK1-203ENST00000391813 U3KQ87 197 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 MYH9P35579 1960 aaKnown RBP18.31■□□□□ 0.52
SHANK1-203ENST00000391813 PHIPQ8WWQ0 1821 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 TNFRSF4P43489 277 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 SLC6A8P48029 635 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 RSU1Q15404 277 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 OR10K2Q6IF99 312 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 ZNF695Q8IW36 515 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 SLC2A12Q8TD20 617 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 FRZBQ92765 325 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 SORBS1Q9BX66 1292 aaKnown RBP18.31■□□□□ 0.52
SHANK1-203ENST00000391813 TPSD1Q9BZJ3 242 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 ADAM18Q9Y3Q7 739 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 TRAV27A0A087WT01 109 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 RGS13O14921 159 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 BATFQ16520 125 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 C17orf107Q6ZR85 190 aa18.31■□□□□ 0.52
SHANK1-203ENST00000391813 OR5AR1Q8NGP9 310 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms