RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 GPX7Q96SL4 187 aaPredicted RBP11.54□□□□□ -0.56
VPS16-202ENST00000380445 CNN2Q99439 309 aaKnown RBP11.54□□□□□ -0.56
VPS16-202ENST00000380445 GYPBP06028 91 aa11.54□□□□□ -0.56
VPS16-202ENST00000380445 PTBP1P26599 531 aaKnown RBP eCLIP11.54□□□□□ -0.56
VPS16-202ENST00000380445 RPS4XP62701 263 aaKnown RBP11.54□□□□□ -0.56
VPS16-202ENST00000380445 CD226Q15762 336 aa11.54□□□□□ -0.56
VPS16-202ENST00000380445 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.54□□□□□ -0.56
VPS16-202ENST00000380445 ZMAT1Q5H9K5 638 aa11.54□□□□□ -0.56
VPS16-202ENST00000380445 NUP54Q7Z3B4 507 aa11.54□□□□□ -0.56
VPS16-202ENST00000380445 MS4A15Q8N5U1 240 aa11.54□□□□□ -0.56
VPS16-202ENST00000380445 LRRC17Q8N6Y2 441 aa11.54□□□□□ -0.56
VPS16-202ENST00000380445 LAT2Q9GZY6 243 aa11.54□□□□□ -0.56
VPS16-202ENST00000380445 COMMD3Q9UBI1 195 aa11.54□□□□□ -0.56
VPS16-202ENST00000380445 FBXL4Q9UKA2 621 aa11.54□□□□□ -0.56
VPS16-202ENST00000380445 TBC1D24Q9ULP9 559 aa11.54□□□□□ -0.56
VPS16-202ENST00000380445 SLC6A5Q9Y345 797 aa11.54□□□□□ -0.56
VPS16-202ENST00000380445 PCDH15Q96QU1 1955 aa11.54□□□□□ -0.56
VPS16-202ENST00000380445 ABCA7Q8IZY2 2146 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 K7ESF4 209 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 TOX3O15405 576 aaPredicted RBP11.53□□□□□ -0.56
VPS16-202ENST00000380445 AZGP1P25311 298 aaKnown RBP11.53□□□□□ -0.56
VPS16-202ENST00000380445 CSF2RBP32927 897 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 ZNF85Q03923 595 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 BAK1Q16611 211 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 SLC29A4Q7RTT9 530 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 ZNF563Q8TA94 476 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 GIMAP1Q8WWP7 306 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 MAP6Q96JE9 813 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 GAL3ST4Q96RP7 486 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 ADOQ96SZ5 270 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 ZNF768Q9H5H4 540 aaKnown RBP11.53□□□□□ -0.56
VPS16-202ENST00000380445 TIGARQ9NQ88 270 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 NANSQ9NR45 359 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 FGF21Q9NSA1 209 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 OR6C76A6NM76 312 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 CENPXA8MT69 81 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 TO15178 435 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 SERPINA3P01011 423 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 APEHP13798 732 aaKnown RBP11.53□□□□□ -0.56
VPS16-202ENST00000380445 IL10RAQ13651 578 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 EBPQ15125 230 aaKnown RBP11.53□□□□□ -0.56
VPS16-202ENST00000380445 ARL9Q6T311 187 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 Q7L0L9 218 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 TPRA1Q86W33 373 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 SYS1Q8N2H4 156 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 C10orf53Q8N6V4 93 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 DTX3Q8N9I9 347 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 GRPEL2Q8TAA5 225 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 CHAC2Q8WUX2 184 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 CITED4Q96RK1 184 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 DCLRE1CQ96SD1 692 aaKnown RBP11.53□□□□□ -0.56
VPS16-202ENST00000380445 ELF4Q99607 663 aaPredicted RBP11.53□□□□□ -0.56
VPS16-202ENST00000380445 ATF6BQ99941 703 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 SRPK3Q9UPE1 567 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 HIF3AQ9Y2N7 669 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 SIT1Q9Y3P8 196 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 GRIP1Q9Y3R0 1128 aa11.53□□□□□ -0.56
VPS16-202ENST00000380445 SIRT4Q9Y6E7 314 aaPredicted RBP11.53□□□□□ -0.56
VPS16-202ENST00000380445 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.52□□□□□ -0.56
VPS16-202ENST00000380445 SMIM30A4D0T7 59 aa11.52□□□□□ -0.56
VPS16-202ENST00000380445 SLC19A2O60779 497 aa11.52□□□□□ -0.56
VPS16-202ENST00000380445 CTRB1P17538 263 aa11.52□□□□□ -0.56
VPS16-202ENST00000380445 MYL9P24844 172 aa11.52□□□□□ -0.56
VPS16-202ENST00000380445 DIO1P49895 249 aa11.52□□□□□ -0.56
VPS16-202ENST00000380445 CAV3P56539 151 aa11.52□□□□□ -0.56
VPS16-202ENST00000380445 ZNF74Q16587 644 aa11.52□□□□□ -0.56
VPS16-202ENST00000380445 VWA2Q5GFL6 755 aa11.52□□□□□ -0.56
VPS16-202ENST00000380445 CTRB2Q6GPI1 263 aa11.52□□□□□ -0.56
VPS16-202ENST00000380445 PAMR1Q6UXH9 720 aa11.52□□□□□ -0.56
VPS16-202ENST00000380445 IDO2Q6ZQW0 420 aa11.52□□□□□ -0.56
VPS16-202ENST00000380445 OR1N1Q8NGS0 311 aa11.52□□□□□ -0.56
VPS16-202ENST00000380445 ZNF501Q96CX3 271 aaPredicted RBP11.52□□□□□ -0.56
VPS16-202ENST00000380445 ZMYND19Q96E35 227 aaPredicted RBP11.52□□□□□ -0.56
VPS16-202ENST00000380445 IER2Q9BTL4 223 aa11.52□□□□□ -0.56
VPS16-202ENST00000380445 DUSP23Q9BVJ7 150 aa11.52□□□□□ -0.56
VPS16-202ENST00000380445 NUDT9Q9BW91 350 aa11.52□□□□□ -0.56
VPS16-202ENST00000380445 MKL2Q9ULH7 1088 aa11.52□□□□□ -0.56
VPS16-202ENST00000380445 BOLA1Q9Y3E2 137 aa11.52□□□□□ -0.56
VPS16-202ENST00000380445 ADAM18Q9Y3Q7 739 aa11.52□□□□□ -0.56
VPS16-202ENST00000380445 IGKV1D-42A0A075B6H8 117 aa11.52□□□□□ -0.57
VPS16-202ENST00000380445 A0A1W2PQD3 144 aa11.52□□□□□ -0.57
VPS16-202ENST00000380445 LRRN3E7EW58 273 aa11.52□□□□□ -0.57
VPS16-202ENST00000380445 GIMD1P0DJR0 217 aa11.52□□□□□ -0.57
VPS16-202ENST00000380445 PNLIPP16233 465 aa11.52□□□□□ -0.57
VPS16-202ENST00000380445 GBX2P52951 348 aaPredicted RBP11.52□□□□□ -0.57
VPS16-202ENST00000380445 NRG3P56975 720 aa11.52□□□□□ -0.57
VPS16-202ENST00000380445 OR12D2P58182 307 aa11.52□□□□□ -0.57
VPS16-202ENST00000380445 CSTF1Q05048 431 aaKnown RBP11.52□□□□□ -0.57
VPS16-202ENST00000380445 ZP2Q05996 745 aa11.52□□□□□ -0.57
VPS16-202ENST00000380445 PYDC2Q56P42 97 aa11.52□□□□□ -0.57
VPS16-202ENST00000380445 PRAMEF17Q5VTA0 474 aa11.52□□□□□ -0.57
VPS16-202ENST00000380445 CBLN3Q6UW01 205 aa11.52□□□□□ -0.57
VPS16-202ENST00000380445 LYPD8Q6UX82 237 aa11.52□□□□□ -0.57
VPS16-202ENST00000380445 NRARPQ7Z6K4 114 aa11.52□□□□□ -0.57
VPS16-202ENST00000380445 GLRX5Q86SX6 157 aa11.52□□□□□ -0.57
VPS16-202ENST00000380445 NPEPL1Q8NDH3 523 aa11.52□□□□□ -0.57
VPS16-202ENST00000380445 KCTD12Q96CX2 325 aaKnown RBP11.52□□□□□ -0.57
VPS16-202ENST00000380445 LRRN3Q9H3W5 708 aa11.52□□□□□ -0.57
VPS16-202ENST00000380445 A0A1W2PQ09 198 aa11.51□□□□□ -0.57
VPS16-202ENST00000380445 BLOC1S5-TXNDC5H3BN57 136 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms