RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 SLC46A1Q96NT5 459 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 KATNB1Q9BVA0 655 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 JAM3Q9BX67 310 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 UBQLN4Q9NRR5 601 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 ATXN7L1Q9ULK2 861 aaPredicted RBP13.59□□□□□ -0.23
PRNP-201ENST00000379440 ADAM18Q9Y3Q7 739 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 IER3IP1Q9Y5U9 82 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 COL6A3P12111 3177 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 CD8B2A6NJW9 211 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 SLC22A31A6NKX4 558 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 UTS2O95399 124 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 IL33O95760 270 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 CD8BP10966 210 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 HIST1H1CP16403 213 aaKnown RBP13.59□□□□□ -0.23
PRNP-201ENST00000379440 FBLP22087 321 aaKnown RBP13.59□□□□□ -0.23
PRNP-201ENST00000379440 PSPHP78330 225 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 ACSM1Q08AH1 577 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 BIKQ13323 160 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 NSDHLQ15738 373 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 ZMAT1Q5H9K5 638 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 SHISA6Q6ZSJ9 500 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 TMPRSS9Q7Z410 1059 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 ARIH2OSQ8N7S6 290 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 DNAJA4Q8WW22 397 aaPredicted RBP13.59□□□□□ -0.23
PRNP-201ENST00000379440 ADIPOR1Q96A54 375 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 MVB12AQ96EY5 273 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 ELF4Q99607 663 aaPredicted RBP13.59□□□□□ -0.23
PRNP-201ENST00000379440 RTN4RQ9BZR6 473 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 FSCN3Q9NQT6 498 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 FGF21Q9NSA1 209 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 ZNF221Q9UK13 617 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 ICAM5Q9UMF0 924 aa13.59□□□□□ -0.23
PRNP-201ENST00000379440 MN1Q10571 1320 aaPredicted RBP13.59□□□□□ -0.23
PRNP-201ENST00000379440 C2orf92A0A1B0GVN3 265 aa13.58□□□□□ -0.23
PRNP-201ENST00000379440 TRDV1A0A1B0GX56 115 aa13.58□□□□□ -0.23
PRNP-201ENST00000379440 SHISA3A0PJX4 238 aa13.58□□□□□ -0.23
PRNP-201ENST00000379440 ISPDA4D126 451 aa13.58□□□□□ -0.23
PRNP-201ENST00000379440 C17orf51A8MQB3 221 aa13.58□□□□□ -0.23
PRNP-201ENST00000379440 NDUFB2O95178 105 aa13.58□□□□□ -0.23
PRNP-201ENST00000379440 FGF9P31371 208 aaPredicted RBP13.58□□□□□ -0.23
PRNP-201ENST00000379440 GPLD1P80108 840 aa13.58□□□□□ -0.23
PRNP-201ENST00000379440 ARHGAP40Q5TG30 622 aa13.58□□□□□ -0.23
PRNP-201ENST00000379440 TMPRSS11AQ6ZMR5 421 aa13.58□□□□□ -0.23
PRNP-201ENST00000379440 OR51L1Q8NGJ5 315 aa13.58□□□□□ -0.23
PRNP-201ENST00000379440 CCDC74AQ96AQ1 378 aa13.58□□□□□ -0.23
PRNP-201ENST00000379440 ZNF501Q96CX3 271 aaPredicted RBP13.58□□□□□ -0.23
PRNP-201ENST00000379440 LCORQ96JN0 433 aaPredicted RBP13.58□□□□□ -0.23
PRNP-201ENST00000379440 ADGRL4Q9HBW9 690 aa13.58□□□□□ -0.23
PRNP-201ENST00000379440 ABCB9Q9NP78 766 aa13.58□□□□□ -0.23
PRNP-201ENST00000379440 DDX28Q9NUL7 540 aaKnown RBP13.58□□□□□ -0.23
PRNP-201ENST00000379440 BABAM2Q9NXR7 383 aa13.58□□□□□ -0.23
PRNP-201ENST00000379440 CHRNA9Q9UGM1 479 aa13.58□□□□□ -0.23
PRNP-201ENST00000379440 SERTAD3Q9UJW9 196 aa13.58□□□□□ -0.23
PRNP-201ENST00000379440 GSTK1Q9Y2Q3 226 aa13.58□□□□□ -0.23
PRNP-201ENST00000379440 IGKV1D-42A0A075B6H8 117 aa13.58□□□□□ -0.24
PRNP-201ENST00000379440 IQCMA0A1B0GVH7 501 aa13.58□□□□□ -0.24
PRNP-201ENST00000379440 TCRBV16S1A1N1A0A5B0 115 aa13.58□□□□□ -0.24
PRNP-201ENST00000379440 GABRPO00591 440 aa13.58□□□□□ -0.24
PRNP-201ENST00000379440 SCDO00767 359 aa13.58□□□□□ -0.24
PRNP-201ENST00000379440 IMPA2O14732 288 aa13.58□□□□□ -0.24
PRNP-201ENST00000379440 SBK2P0C263 348 aa13.58□□□□□ -0.24
PRNP-201ENST00000379440 HCCSP53701 268 aa13.58□□□□□ -0.24
PRNP-201ENST00000379440 SKP2Q13309 424 aa13.58□□□□□ -0.24
PRNP-201ENST00000379440 MARCH9Q86YJ5 346 aa13.58□□□□□ -0.24
PRNP-201ENST00000379440 FAM98AQ8NCA5 519 aaKnown RBP13.58□□□□□ -0.24
PRNP-201ENST00000379440 FAM71CQ8NEG0 241 aa13.58□□□□□ -0.24
PRNP-201ENST00000379440 RPRD1BQ9NQG5 326 aaKnown RBP13.58□□□□□ -0.24
PRNP-201ENST00000379440 MUTYHQ9UIF7 546 aa13.58□□□□□ -0.24
PRNP-201ENST00000379440 BAIAP2Q9UQB8 552 aa13.58□□□□□ -0.24
PRNP-201ENST00000379440 E9PI62 339 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 GTPBP1O00178 669 aaKnown RBP13.57□□□□□ -0.24
PRNP-201ENST00000379440 MEN1O00255 615 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 NCR1O76036 304 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 DHPSP49366 369 aaPredicted RBP13.57□□□□□ -0.24
PRNP-201ENST00000379440 GALEQ14376 348 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 ELAVL1Q15717 326 aaKnown RBP13.57□□□□□ -0.24
PRNP-201ENST00000379440 ARHGAP11AQ6P4F7 1023 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 C9orf40Q8IXQ3 194 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 ZNF527Q8NB42 609 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 SMPDL3BQ92485 455 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 RBM14Q96PK6 669 aaKnown RBP13.57□□□□□ -0.24
PRNP-201ENST00000379440 TTTY10Q9BZA0 68 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 MIXL1Q9H2W2 232 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 SEMA5BQ9P283 1151 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 CMAHPQ9Y471 501 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 V9GYH0 126 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 A0A1W2PQL4 384 aaPredicted RBP13.57□□□□□ -0.24
PRNP-201ENST00000379440 CENPXA8MT69 81 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 CASKO14936 926 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 ICOSLGO75144 302 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 HLA-DPB1P04440 258 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 SPNP16150 400 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 MST1P26927 711 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 RPL4P36578 427 aaKnown RBP13.57□□□□□ -0.24
PRNP-201ENST00000379440 MADCAM1Q13477 382 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 TMEM91Q6ZNR0 172 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 UTS2BQ765I0 119 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 CARFQ8N187 725 aa13.57□□□□□ -0.24
PRNP-201ENST00000379440 ZMYND19Q96E35 227 aaPredicted RBP13.57□□□□□ -0.24
PRNP-201ENST00000379440 MED18Q9BUE0 208 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms