RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ASB15Q8WXK1 588 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 ITPKCQ96DU7 683 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 CLIP3Q96DZ5 547 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 GAL3ST4Q96RP7 486 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 CNN2Q99439 309 aaKnown RBP9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 TM9SF2Q99805 663 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 KATNB1Q9BVA0 655 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 WWTR1Q9GZV5 400 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 WDR70Q9NW82 654 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 ADAM30Q9UKF2 790 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 HIF3AQ9Y2N7 669 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 YARS2Q9Y2Z4 477 aaKnown RBP9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 IER3IP1Q9Y5U9 82 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 SPTBP11277 2137 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 IGKV1D-42A0A075B6H8 117 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 IGLV3-12A0A075B6K2 115 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 A8MU76 341 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 ALG1L2C9J202 215 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 PLPP2O43688 288 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 CDC40O60508 579 aaKnown RBP eCLIP9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 CD1AP06126 327 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 OR2T7P0C7T2 308 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 ZNF806P0C7X5 589 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 HIST1H1CP16403 213 aaKnown RBP9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 PGCP20142 388 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 MTNR1BP49286 362 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 DHPSP49366 369 aaPredicted RBP9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 CCR4P51679 360 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 HSF2Q03933 536 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 PLCXD2Q0VAA5 305 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 ZNF74Q16587 644 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 CLPPQ16740 277 aaPredicted RBP9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 VWA2Q5GFL6 755 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 VASNQ6EMK4 673 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 XKRXQ6PP77 449 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 METAP1DQ6UB28 335 aaPredicted RBP9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 PAMR1Q6UXH9 720 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 VASH1Q7L8A9 365 aaPredicted RBP9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 SNX29P2Q8IUI4 249 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 EGFL6Q8IUX8 553 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 C9orf40Q8IXQ3 194 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 ZFP41Q8N8Y5 198 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 ZNF441Q8N8Z8 693 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 OR2T27Q8NH04 317 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 OR5W2Q8NH69 310 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 ZNF563Q8TA94 476 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 NEIL3Q8TAT5 605 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 ACOT12Q8WYK0 555 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 TP53INP1Q96A56 240 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 ARSGQ96EG1 525 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 LMF1Q96S06 567 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 NUDT22Q9BRQ3 303 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 TMED9Q9BVK6 235 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 SLC7A5P2Q9GIP4 190 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 VN1R1Q9GZP7 353 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 ADAM19Q9H013 955 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 TPK1Q9H3S4 243 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 MKL2Q9ULH7 1088 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 LHX6Q9UPM6 363 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 V9GYH0 126 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 NBEAQ8NFP9 2946 aa9.56□□□□□ -0.88
POLR2J3-201ENST00000379340 IGSF10Q6WRI0 2623 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 ZC3H12DA2A288 527 aaKnown RBP9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 GNB5O14775 395 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 ICOSLGO75144 302 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 TXNDC12O95881 172 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 SERPINA3P01011 423 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 CYC1P08574 325 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 GTF2E2P29084 291 aaKnown RBP9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 DIO1P49895 249 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 SLC25A1P53007 311 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 ZNF85Q03923 595 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 DNASE1L3Q13609 305 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 PON3Q15166 354 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 EMC4Q5J8M3 183 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 PLA2G2CQ5R387 149 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 FCRLBQ6BAA4 426 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 FAAH2Q6GMR7 532 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 TPRA1Q86W33 373 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 MISPQ8IVT2 679 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 LAX1Q8IWV1 398 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 MS4A15Q8N5U1 240 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 GDPD1Q8N9F7 314 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 GATSQ8NAP1 163 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 CYB561A3Q8NBI2 242 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 FAM83FQ8NEG4 500 aaPredicted RBP9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 SDR9C7Q8NEX9 313 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 OR4D9Q8NGE8 314 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 OR4K13Q8NH42 304 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 NAT6Q93015 286 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 OMA1Q96E52 524 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 ADOQ96SZ5 270 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 SDHCQ99643 169 aaPredicted RBP9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 TIMP4Q99727 224 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 NMNAT2Q9BZQ4 307 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 ISG20L2Q9H9L3 353 aaKnown RBP9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 FKRPQ9H9S5 495 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 MMP25Q9NPA2 562 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 NANSQ9NR45 359 aa9.55□□□□□ -0.88
POLR2J3-201ENST00000379340 HEATR5AQ86XA9 2040 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms