RNA–Protein interactions for RNA: ENST00000378045.4

FUNDC1-201, Transcript of FUN14 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FUNDC1, Length 1,196 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUNDC1-201ENST00000378045 TAS2R16Q9NYV7 291 aa11.21□□□□□ -0.61
FUNDC1-201ENST00000378045 CISD1Q9NZ45 108 aaKnown RBP11.21□□□□□ -0.61
FUNDC1-201ENST00000378045 CALML5Q9NZT1 146 aa11.21□□□□□ -0.61
FUNDC1-201ENST00000378045 MALT1Q9UDY8 824 aa11.21□□□□□ -0.61
FUNDC1-201ENST00000378045 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.21□□□□□ -0.61
FUNDC1-201ENST00000378045 SLC9A8Q9Y2E8 581 aa11.21□□□□□ -0.61
FUNDC1-201ENST00000378045 SLC25A15Q9Y619 301 aa11.21□□□□□ -0.61
FUNDC1-201ENST00000378045 ANK3Q12955 4377 aaKnown RBP11.21□□□□□ -0.62
FUNDC1-201ENST00000378045 A0A096LPI6 279 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 TMEM247A6NEH6 219 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 GPIP06744 558 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 RPS5P46782 204 aaKnown RBP11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 TUBA1BP68363 451 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 TUBA4AP68366 448 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 TXNL4AP83876 142 aaKnown RBP11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 H3F3AP84243 136 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 SF3A3Q12874 501 aaKnown RBP eCLIP11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 SLC17A1Q14916 467 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 GABRA6Q16445 453 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 GLIPR1L2Q4G1C9 344 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 HIKESHIQ53FT3 197 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 AGKQ53H12 422 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 GCNT6Q5T4J0 391 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 RNF220Q5VTB9 566 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 C1orf140Q5VVS0 124 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 AP1ARQ63HQ0 302 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 PAQR6Q6TCH4 344 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 PRSS57Q6UWY2 283 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 MSANTD1Q6ZTZ1 278 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 TUBA1AQ71U36 451 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 AAED1Q7RTV5 226 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 ZNF440Q8IYI8 595 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 GOLGA6L1Q8N7Z2 621 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 ZIC4Q8N9L1 334 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 RNF217Q8TC41 542 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 SPDL1Q96EA4 605 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 C7orf26Q96N11 449 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 TRAF4Q9BUZ4 470 aaPredicted RBP11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 SPATA9Q9BWV2 254 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 TAPBPLQ9BX59 468 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 ALG2Q9H553 416 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 A4GALTQ9NPC4 353 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 TRAPPC4Q9Y296 219 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 ABCA2Q9BZC7 2435 aa11.2□□□□□ -0.62
FUNDC1-201ENST00000378045 A0A0G2JPF8 293 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 AQP7P3A6NL99 342 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 TMEM229AB2RXF0 380 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 HNRNPCL2B2RXH8 293 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 HNRNPCL3B7ZW38 293 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 E7EQL1 145 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 OVOL3O00110 214 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 FAAHO00519 579 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 DNPH1O43598 174 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 EIF1BO60739 113 aaKnown RBP11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 HNRNPCL1O60812 293 aaKnown RBP11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 PGM3O95394 542 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 CD8AP01732 235 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 THBS1P07996 1170 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 HNRNPCL4P0DMR1 293 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 CD40P25942 277 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 HTR2AP28223 471 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 CLK1P49759 484 aaKnown RBP11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 SELENOPP49908 381 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 PRSS12P56730 875 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 IL1RL1Q01638 556 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 PRAMEF8Q5VWM4 474 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 PRAMEF7Q5VXH5 474 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 WDR31Q8NA23 367 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 BBS10Q8TAM1 723 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 PMM1Q92871 262 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 KTI12Q96EK9 354 aaPredicted RBP11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 RADILQ96JH8 1075 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 CACNG6Q9BXT2 260 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 SLCO5A1Q9H2Y9 848 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 HEATR1Q9H583 2144 aaKnown RBP11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 VAPAQ9P0L0 249 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 ATP23Q9Y6H3 246 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 CSPG4Q6UVK1 2322 aa11.19□□□□□ -0.62
FUNDC1-201ENST00000378045 PLCE1Q9P212 2302 aa11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 ELOA3DA6NLF2 546 aaPredicted RBP11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 A8MVM7 634 aa11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 ATP6V1G2-DDX39BF2Z307 99 aa11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 SSX4O60224 188 aa11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 TPST1O60507 370 aa11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 KRT33AO76009 404 aa11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 SEC14L2O76054 403 aa11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 AHSA1O95433 338 aa11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 LGI1O95970 557 aa11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 ARAFP10398 606 aa11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 P2RY4P51582 365 aa11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 IRX1P78414 480 aaPredicted RBP11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 KRTAP1-1Q07627 177 aa11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 ELOA3BQ3SY89 546 aa11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 TMEM225Q6GV28 225 aa11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 NIPAL3Q6P499 406 aa11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 BLOC1S3Q6QNY0 202 aa11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 TMEM108Q6UXF1 575 aa11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 LINGO2Q7L985 606 aa11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 ELOA3Q8NG57 546 aa11.18□□□□□ -0.62
FUNDC1-201ENST00000378045 TRMT61AQ96FX7 289 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms