RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 MSTNO14793 375 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 DNAJC8O75937 253 aaPredicted RBP11.81□□□□□ -0.52
CKAP2-202ENST00000378034 STAMBPO95630 424 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 YES1P07947 543 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 CD8BP10966 210 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 ITGA2P17301 1181 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 SLC16A1P53985 500 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 GABPB1Q06547 395 aaPredicted RBP11.81□□□□□ -0.52
CKAP2-202ENST00000378034 TRAP1Q12931 704 aaKnown RBP11.81□□□□□ -0.52
CKAP2-202ENST00000378034 PIN1Q13526 163 aaPredicted RBP11.81□□□□□ -0.52
CKAP2-202ENST00000378034 TMEM201Q5SNT2 666 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 LCN8Q6JVE9 175 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 KTI12Q96EK9 354 aaPredicted RBP11.81□□□□□ -0.52
CKAP2-202ENST00000378034 PSD2Q9BQI7 771 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 UCK2Q9BZX2 261 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 EMC3Q9P0I2 261 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 A4GNTQ9UNA3 340 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 ENPP4Q9Y6X5 453 aa11.81□□□□□ -0.52
CKAP2-202ENST00000378034 INTS1Q8N201 2190 aaKnown RBP11.8□□□□□ -0.52
CKAP2-202ENST00000378034 BAHCC1Q9P281 2608 aa11.8□□□□□ -0.52
CKAP2-202ENST00000378034 HTR3EA5X5Y0 456 aa11.8□□□□□ -0.52
CKAP2-202ENST00000378034 AQP7P3A6NL99 342 aa11.8□□□□□ -0.52
CKAP2-202ENST00000378034 GPR171O14626 319 aa11.8□□□□□ -0.52
CKAP2-202ENST00000378034 PDE5AO76074 875 aa11.8□□□□□ -0.52
CKAP2-202ENST00000378034 VAMP5O95183 116 aa11.8□□□□□ -0.52
CKAP2-202ENST00000378034 IGF2P01344 180 aa11.8□□□□□ -0.52
CKAP2-202ENST00000378034 GTF2E2P29084 291 aaKnown RBP11.8□□□□□ -0.52
CKAP2-202ENST00000378034 AGTR1P30556 359 aa11.8□□□□□ -0.52
CKAP2-202ENST00000378034 RPS5P46782 204 aaKnown RBP11.8□□□□□ -0.52
CKAP2-202ENST00000378034 PCYT1AP49585 367 aa11.8□□□□□ -0.52
CKAP2-202ENST00000378034 TFF3Q07654 80 aa11.8□□□□□ -0.52
CKAP2-202ENST00000378034 PGM2L1Q6PCE3 622 aa11.8□□□□□ -0.52
CKAP2-202ENST00000378034 OFCC1Q8IZS5 231 aa11.8□□□□□ -0.52
CKAP2-202ENST00000378034 TAAR8Q969N4 342 aa11.8□□□□□ -0.52
CKAP2-202ENST00000378034 PRSS27Q9BQR3 290 aa11.8□□□□□ -0.52
CKAP2-202ENST00000378034 FNDC11Q9BVV2 318 aa11.8□□□□□ -0.52
CKAP2-202ENST00000378034 SF3B5Q9BWJ5 86 aaKnown RBP11.8□□□□□ -0.52
CKAP2-202ENST00000378034 PLSCR4Q9NRQ2 329 aa11.8□□□□□ -0.52
CKAP2-202ENST00000378034 PROCRQ9UNN8 238 aa11.8□□□□□ -0.52
CKAP2-202ENST00000378034 FAM32AQ9Y421 112 aaKnown RBP11.8□□□□□ -0.52
CKAP2-202ENST00000378034 CORINQ9Y5Q5 1042 aa11.8□□□□□ -0.52
CKAP2-202ENST00000378034 A1L4Q6 167 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 NKX2-6A6NCS4 301 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 PRSS44E7EML9 344 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 MT-ATP6P00846 226 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 CGAP01215 116 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 SIRPAP78324 504 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 OTUD3Q5T2D3 398 aaPredicted RBP11.79□□□□□ -0.52
CKAP2-202ENST00000378034 VWA1Q6PCB0 445 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 WDR88Q6ZMY6 472 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 BTLAQ7Z6A9 289 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 TUSC5Q8IXB3 177 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 MCUR1Q96AQ8 359 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 DNAJA3Q96EY1 480 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 C7orf34Q96L11 122 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 TRIM15Q9C019 465 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 KLHL4Q9C0H6 718 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 MMADHCQ9H3L0 296 aaPredicted RBP11.79□□□□□ -0.52
CKAP2-202ENST00000378034 ANKRD19PQ9H560 264 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 PLEKHB1Q9UF11 243 aaPredicted RBP11.79□□□□□ -0.52
CKAP2-202ENST00000378034 ING1Q9UK53 422 aaPredicted RBP11.79□□□□□ -0.52
CKAP2-202ENST00000378034 CLEC4AQ9UMR7 237 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 RASD1Q9Y272 281 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 USP9YO00507 2555 aaPredicted RBP11.79□□□□□ -0.52
CKAP2-202ENST00000378034 ZNF716A6NP11 495 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 EEF1E1-BLOC1S5C9J1V9 151 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 GSC2O15499 205 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 EEF1E1O43324 174 aaKnown RBP11.79□□□□□ -0.52
CKAP2-202ENST00000378034 AKR7A3O95154 331 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 SEMG1P04279 462 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 RHCEP18577 417 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 ATP6V1B2P21281 511 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 PEX19P40855 299 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 MS4A2Q01362 244 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 TRAM2Q15035 370 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 TMEM99Q8N816 258 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 SCAIQ8N9R8 606 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 ADPRHL1Q8NDY3 354 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 RNASE6Q93091 150 aaKnown RBP11.79□□□□□ -0.52
CKAP2-202ENST00000378034 SLC25A36Q96CQ1 311 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 CLPTM1LQ96KA5 538 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 ZNF300Q96RE9 604 aaPredicted RBP11.79□□□□□ -0.52
CKAP2-202ENST00000378034 NDUFAF4Q9P032 175 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 B3GALT5Q9Y2C3 310 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 SPTBN1Q01082 2364 aaKnown RBP11.79□□□□□ -0.52
CKAP2-202ENST00000378034 CACNA1CQ13936 2221 aa11.79□□□□□ -0.52
CKAP2-202ENST00000378034 DOPEY2Q9Y3R5 2298 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 HCFC1P51610 2035 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 A8MXE2 369 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 EBAG9O00559 213 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 PRSS23O95084 383 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 BGLAPP02818 100 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 KLK2P20151 261 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 SLC17A1Q14916 467 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 TMEM225Q6GV28 225 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 CYP2R1Q6VVX0 501 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 GALNT5Q7Z7M9 940 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 STK32CQ86UX6 486 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 NKAIN4Q8IVV8 208 aa11.78□□□□□ -0.52
CKAP2-202ENST00000378034 CCDC103Q8IW40 242 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms