RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 DPP4P27487 766 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 MAP2K3P46734 347 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 FAM69AQ5T7M9 428 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 OR7E24Q6IFN5 339 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 OR1J4Q8NGS1 313 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 ZNF350Q9GZX5 532 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 ATG5Q9H1Y0 275 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 PLCXD1Q9NUJ7 323 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 ANKRD10Q9NXR5 420 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 PRAMEF25A6NGN4 478 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 CSO75390 466 aaKnown RBP13.34□□□□□ -0.27
TCOF1-202ENST00000377797 OR2T7P0C7T2 308 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 EEF1A1P68104 462 aaKnown RBP13.34□□□□□ -0.27
TCOF1-202ENST00000377797 GAB4Q2WGN9 574 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 RAB11FIP2Q7L804 512 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 DPY19L4Q7Z388 723 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 GRINAQ7Z429 371 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 OR2I1PQ8NGU4 316 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 OR2T27Q8NH04 317 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 TRMT10AQ8TBZ6 339 aaKnown RBP13.34□□□□□ -0.27
TCOF1-202ENST00000377797 HAVCR2Q8TDQ0 301 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 RHNO1Q9BSD3 238 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 CORINQ9Y5Q5 1042 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 ARRDC5A6NEK1 342 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 CSNK1A1P48729 337 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 SLC26A5P58743 744 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 ARG2P78540 354 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 SLC22A10Q63ZE4 541 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 MORN4Q8NDC4 146 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 OR6Q1Q8NGQ2 317 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 OR1L3Q8NH93 324 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 FCAMRQ8WWV6 532 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 FCRL1Q96LA6 429 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 SLC25A18Q9H1K4 315 aa13.34□□□□□ -0.27
TCOF1-202ENST00000377797 EP300Q09472 2414 aaPredicted RBP13.33□□□□□ -0.28
TCOF1-202ENST00000377797 INMT-MINDY4F8WBC2 141 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 ICOSLGO75144 302 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 TSPAN9O75954 239 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 MAKP20794 623 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 PCBP3P57721 371 aaKnown RBP13.33□□□□□ -0.28
TCOF1-202ENST00000377797 UBE2IP63279 158 aaKnown RBP13.33□□□□□ -0.28
TCOF1-202ENST00000377797 SQSTM1Q13501 440 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 ADPRMQ3LIE5 342 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 C4orf46Q504U0 113 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 SLC35D2Q76EJ3 337 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 KDM8Q8N371 416 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 DNAJC5GQ8N7S2 189 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 TRAV6A0A075B6T7 132 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 CIB4A0PJX0 185 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 GABRPO00591 440 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 RBBP9O75884 186 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 NKX2-2O95096 273 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 IL1AP01583 271 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 APOC1P02654 83 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 EPHA8P29322 1005 aaPredicted RBP13.33□□□□□ -0.28
TCOF1-202ENST00000377797 PEBP1P30086 187 aaKnown RBP13.33□□□□□ -0.28
TCOF1-202ENST00000377797 CD97P48960 835 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 MAN2A2P49641 1150 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 P2RX1P51575 399 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 CD83Q01151 205 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 C1orf140Q5VVS0 124 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 CNIH2Q6PI25 160 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 CPEB2Q7Z5Q1 589 aaKnown RBP13.33□□□□□ -0.28
TCOF1-202ENST00000377797 SETD6Q8TBK2 473 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 ZNF775Q96BV0 537 aaPredicted RBP13.33□□□□□ -0.28
TCOF1-202ENST00000377797 VWCEQ96DN2 955 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 CHIAQ9BZP6 476 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 ZNF226Q9NYT6 803 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 SLC2A10O95528 541 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 S100GP29377 79 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 GABRA5P31644 462 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 BCAP31P51572 246 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 RPS25P62851 125 aaKnown RBP13.33□□□□□ -0.28
TCOF1-202ENST00000377797 MPEG1Q2M385 716 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 COL28A1Q2UY09 1125 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 PLK5Q496M5 336 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 XKRXQ6PP77 449 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 GAB3Q8WWW8 586 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 CCDC32Q9BV29 185 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 ELOVL3Q9HB03 270 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 SYT7O43581 403 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 TDRD6O60522 2096 aaKnown RBP13.33□□□□□ -0.28
TCOF1-202ENST00000377797 IGHG1P01857 330 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 POU3F2P20265 443 aaPredicted RBP13.33□□□□□ -0.28
TCOF1-202ENST00000377797 EMDP50402 254 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 CAV3P56539 151 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 ZNF628Q5EBL2 1059 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 OR4C3Q8NH37 302 aa13.33□□□□□ -0.28
TCOF1-202ENST00000377797 CPNE2Q96FN4 548 aaPredicted RBP13.33□□□□□ -0.28
TCOF1-202ENST00000377797 ZNF878C9JN71 531 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 F5H5K5 113 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 E2F1Q01094 437 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 EXT1Q16394 746 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 TCEAL6Q6IPX3 200 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 PPP1R14BQ96C90 147 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 SLC41A2Q96JW4 573 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 TEAD3Q99594 435 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 ADAM18Q9Y3Q7 739 aa13.32□□□□□ -0.28
TCOF1-202ENST00000377797 ERCC1P07992 297 aaPredicted RBP13.32□□□□□ -0.28
TCOF1-202ENST00000377797 LTBRP36941 435 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms