RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 TBPL2Q6SJ96 375 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 TPRA1Q86W33 373 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 ZNF687Q8N1G0 1237 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 DCUN1D4Q92564 292 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 COQ3Q9NZJ6 369 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 CYB5BO43169 146 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 ABHD16AO95870 558 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 MT-CO2P00403 227 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 PTGS2P35354 604 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 MTCP1P56278 107 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 SDSLQ96GA7 329 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 DPCDQ9BVM2 203 aaPredicted RBP12.63□□□□□ -0.39
GPC6-201ENST00000377047 MFRPQ9BY79 579 aa12.63□□□□□ -0.39
GPC6-201ENST00000377047 TSPAN10Q9H1Z9 355 aaPredicted RBP12.63□□□□□ -0.39
GPC6-201ENST00000377047 FRMPD2BQ6IN97 320 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 MBOAT2Q6ZWT7 520 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 PHC2Q8IXK0 858 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 EDEM2Q9BV94 578 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 ZFP57Q9NU63 452 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 BABAM2Q9NXR7 383 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 ANKRD34BA5PLL1 514 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 TRIM64CA6NLI5 447 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 NFATC3Q12968 1075 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 IKZF1Q13422 519 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 COX20Q5RI15 118 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 ZNF813Q6ZN06 617 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 GDPD1Q8N9F7 314 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 FAM83FQ8NEG4 500 aaPredicted RBP12.62□□□□□ -0.39
GPC6-201ENST00000377047 TRAPPC2LQ9UL33 140 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 USP22Q9UPT9 525 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 CXCL10P02778 98 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 GLI3P10071 1580 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 LIPCP11150 499 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 RPS19BP1Q86WX3 136 aaKnown RBP12.62□□□□□ -0.39
GPC6-201ENST00000377047 ETFBKMTQ8IXQ9 262 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 OR56B2PQ8NGI1 322 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 GOT1L1Q8NHS2 421 aaPredicted RBP12.62□□□□□ -0.39
GPC6-201ENST00000377047 SLC7A13Q8TCU3 470 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 FGF14Q92915 247 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 OR5B12Q96R08 314 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 DEFB127Q9H1M4 99 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 LYRM1O43325 122 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 NPSR1Q6W5P4 371 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 ESPNLQ6ZVH7 1005 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 OR4D6Q8NGJ1 314 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 H1FXQ92522 213 aaKnown RBP12.62□□□□□ -0.39
GPC6-201ENST00000377047 VRK1Q99986 396 aaPredicted RBP12.62□□□□□ -0.39
GPC6-201ENST00000377047 NHSQ6T4R5 1651 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 MRPS14O60783 128 aaKnown RBP12.62□□□□□ -0.39
GPC6-201ENST00000377047 SLC22A5O76082 557 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 TNFSF15O95150 251 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 CCR5P51681 352 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 PPP2CBP62714 309 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 PPP2CAP67775 309 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 SLX4IPQ5VYV7 408 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 B3GNT8Q7Z7M8 397 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 CD163Q86VB7 1156 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 ALG12Q9BV10 488 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 SDK1Q7Z5N4 2213 aa12.62□□□□□ -0.39
GPC6-201ENST00000377047 A0A1B0GWA3 101 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 SC5DO75845 299 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 TP53P04637 393 aaPredicted RBP12.61□□□□□ -0.39
GPC6-201ENST00000377047 HTR2AP28223 471 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 SULF2Q8IWU5 870 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 MAFIPQ8WZ33 124 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 CMSS1Q9BQ75 279 aaKnown RBP12.61□□□□□ -0.39
GPC6-201ENST00000377047 RLIMQ9NVW2 624 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 LOXL2Q9Y4K0 774 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 CACNG2Q9Y698 323 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 TMEM72A0PK05 275 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 GPR85P60893 370 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 LINC00346Q8IVM7 164 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 FRMD1Q8N878 549 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 CNOT9Q92600 299 aaKnown RBP12.61□□□□□ -0.39
GPC6-201ENST00000377047 NICN1Q9BSH3 213 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 ZNF281Q9Y2X9 895 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 HPGDSO60760 199 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 OR7C1O76099 320 aaPredicted RBP12.61□□□□□ -0.39
GPC6-201ENST00000377047 HLA-DMAP28067 261 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 MPEG1Q2M385 716 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 ZNF691Q5VV52 312 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 FBXW12Q6X9E4 464 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 SNX18Q96RF0 628 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 SLC19A3Q9BZV2 496 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 LYRM4Q9HD34 91 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 PRMT8Q9NR22 394 aaPredicted RBP12.61□□□□□ -0.39
GPC6-201ENST00000377047 RASD1Q9Y272 281 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 PRAMEF27A3QJZ7 478 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 A6NIN4 97 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 NRG2O14511 850 aaPredicted RBP12.61□□□□□ -0.39
GPC6-201ENST00000377047 B4GAT1O43505 415 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 GAAP10253 952 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 CA5AP35218 305 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 PGFP49763 221 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 TAS2R20P59543 309 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 LTBQ06643 244 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 PRAMEF9Q5VWM5 478 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 RTL6Q6ICC9 239 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 DPY19L2P1Q6NXN4 242 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 ZNF836Q6ZNA1 936 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms