RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 IFNGP01579 166 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 IL1AP01583 271 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 ETV6P41212 452 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 ACAA2P42765 397 aaKnown RBP7.55□□□□□ -1.2
UBR4-202ENST00000375224 SLC1A3P43003 542 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 POU3F4P49335 361 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 CSNK1EP49674 416 aaKnown RBP7.55□□□□□ -1.2
UBR4-202ENST00000375224 GZMKP49863 264 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 ACSM1Q08AH1 577 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 NPSR1Q6W5P4 371 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 TMPRSS11AQ6ZMR5 421 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 WDR88Q6ZMY6 472 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 RTL4Q6ZR62 310 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 MEPCEQ7L2J0 689 aaKnown RBP7.55□□□□□ -1.2
UBR4-202ENST00000375224 ZAR1Q86SH2 424 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 CPOQ8IVL8 374 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 GPR135Q8IZ08 494 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 SHISA5Q8N114 240 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 ZNF615Q8N8J6 731 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 ZNF527Q8NB42 609 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 CLRN3Q8NCR9 226 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 KNL1Q8NG31 2342 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 OR4C6Q8NH72 309 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 PFN4Q8NHR9 129 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 RBPMSQ93062 196 aaKnown RBP7.55□□□□□ -1.2
UBR4-202ENST00000375224 LRFN5Q96NI6 719 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 ARHGAP9Q9BRR9 750 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 IFT27Q9BW83 186 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 NIPAL2Q9H841 368 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 TBC1D17Q9HA65 648 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 MKKSQ9NPJ1 570 aaPredicted RBP7.55□□□□□ -1.2
UBR4-202ENST00000375224 INPP5EQ9NRR6 644 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 ADAM30Q9UKF2 790 aa7.55□□□□□ -1.2
UBR4-202ENST00000375224 IGHV1OR21-1A0A087WYE8 117 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 SERINC4A6NH21 518 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 SLC22A31A6NKX4 558 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 RIIAD1A6NNX1 92 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 BHLHE40O14503 412 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 NTN1O95631 604 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 IGKV1D-16P01601 117 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 IGHA1P01876 353 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 CT45A8P0DMV1 189 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 CT45A9P0DMV2 189 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 GLB1P16278 677 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 MAOAP21397 527 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 SLC6A6P31641 620 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 CHAF1BQ13112 559 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 GRK1Q15835 563 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 SOWAHCQ53LP3 525 aaPredicted RBP7.54□□□□□ -1.2
UBR4-202ENST00000375224 CT45A2Q5DJT8 189 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 PDSS1Q5T2R2 415 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 ZC3H14Q6PJT7 736 aaKnown RBP7.54□□□□□ -1.2
UBR4-202ENST00000375224 PAQR6Q6TCH4 344 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 BCORP1Q8N888 145 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 OR5T2Q8NGG2 359 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 GRHL3Q8TE85 626 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 PTCHD1Q96NR3 888 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 SLC46A1Q96NT5 459 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 ZNF426Q9BUY5 554 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 RNF167Q9H6Y7 350 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 CMC2Q9NRP2 79 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 ZNF275Q9NSD4 429 aaPredicted RBP7.54□□□□□ -1.2
UBR4-202ENST00000375224 CLEC4AQ9UMR7 237 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 SIGLEC7Q9Y286 467 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 PCDHGA9Q9Y5G4 932 aaKnown RBP7.54□□□□□ -1.2
UBR4-202ENST00000375224 CLDN16Q9Y5I7 305 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 GON4LQ3T8J9 2241 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 C17orf105B2RV13 164 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 PRR23D1E9PI22 279 aaPredicted RBP7.54□□□□□ -1.2
UBR4-202ENST00000375224 SDC3O75056 442 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 CSTAP01040 98 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 ZGLP1P0C6A0 271 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 LIMS3P0CW19 117 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 LIMS4P0CW20 117 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 RNF224P0DH78 156 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 PRR23D2P0DMB1 279 aaPredicted RBP7.54□□□□□ -1.2
UBR4-202ENST00000375224 HK1P19367 917 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 S100PP25815 95 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 LCN1P31025 176 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 GABRA5P31644 462 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 RORAP35398 523 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 QSOX2Q6ZRP7 698 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 NRARPQ7Z6K4 114 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 YIPF7Q8N8F6 280 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 OR4N2Q8NGD1 307 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 OR6S1Q8NH40 331 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 GATAD2BQ8WXI9 593 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 ATOH1Q92858 354 aaPredicted RBP7.54□□□□□ -1.2
UBR4-202ENST00000375224 KCTD7Q96MP8 289 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 NDC1Q9BTX1 674 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 PPIL3Q9H2H8 161 aaKnown RBP7.54□□□□□ -1.2
UBR4-202ENST00000375224 HINT3Q9NQE9 182 aaKnown RBP7.54□□□□□ -1.2
UBR4-202ENST00000375224 NIT2Q9NQR4 276 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 FLRT3Q9NZU0 649 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 SEMA5BQ9P283 1151 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 SERTAD3Q9UJW9 196 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 KLF2Q9Y5W3 355 aaPredicted RBP7.54□□□□□ -1.2
UBR4-202ENST00000375224 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 SNX4O95219 450 aa7.54□□□□□ -1.2
UBR4-202ENST00000375224 CD63P08962 238 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms