RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 SYNPRQ8TBG9 265 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 PAQR8Q8TEZ7 354 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 ING5Q8WYH8 240 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 DIO2Q92813 273 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 C14orf79Q96F83 325 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 IL23AQ9NPF7 189 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 CD63P08962 238 aa11.9□□□□□ -0.51
PRPF4-201ENST00000374198 CD79AP11912 226 aa11.9□□□□□ -0.51
PRPF4-201ENST00000374198 APEHP13798 732 aaKnown RBP11.9□□□□□ -0.51
PRPF4-201ENST00000374198 RCC1P18754 421 aaPredicted RBP11.9□□□□□ -0.51
PRPF4-201ENST00000374198 CDK2P24941 298 aa11.9□□□□□ -0.51
PRPF4-201ENST00000374198 THPOP40225 353 aa11.9□□□□□ -0.51
PRPF4-201ENST00000374198 RIDAP52758 137 aaKnown RBP11.9□□□□□ -0.51
PRPF4-201ENST00000374198 FAM76BQ5HYJ3 339 aa11.9□□□□□ -0.51
PRPF4-201ENST00000374198 CHST9Q7L1S5 443 aa11.9□□□□□ -0.51
PRPF4-201ENST00000374198 GTPBP8Q8N3Z3 284 aaPredicted RBP11.9□□□□□ -0.51
PRPF4-201ENST00000374198 OR4C16Q8NGL9 310 aa11.9□□□□□ -0.51
PRPF4-201ENST00000374198 DUSP19Q8WTR2 217 aa11.9□□□□□ -0.51
PRPF4-201ENST00000374198 LINC01599Q8WXQ3 324 aa11.9□□□□□ -0.51
PRPF4-201ENST00000374198 HIST1H2BAQ96A08 127 aa11.9□□□□□ -0.51
PRPF4-201ENST00000374198 OR14A2Q96R54 314 aa11.9□□□□□ -0.51
PRPF4-201ENST00000374198 TMPRSS5Q9H3S3 457 aa11.9□□□□□ -0.51
PRPF4-201ENST00000374198 CCDC86Q9H6F5 360 aaKnown RBP11.9□□□□□ -0.51
PRPF4-201ENST00000374198 POLE3Q9NRF9 147 aa11.9□□□□□ -0.51
PRPF4-201ENST00000374198 TRPC4Q9UBN4 977 aa11.9□□□□□ -0.51
PRPF4-201ENST00000374198 PCDHB8Q9UN66 801 aa11.9□□□□□ -0.51
PRPF4-201ENST00000374198 ZNF337Q9Y3M9 751 aa11.9□□□□□ -0.51
PRPF4-201ENST00000374198 RNF222A6NCQ9 220 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 NPIPB15A6NHN6 443 aaPredicted RBP11.89□□□□□ -0.51
PRPF4-201ENST00000374198 DBX1A6NMT0 343 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 K7ERQ8 282 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 RAB40ALP0C0E4 278 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 OR8U8P0C7N1 319 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 SELPP16109 830 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 SDHAP31040 664 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 RPS15P62841 145 aaKnown RBP11.89□□□□□ -0.51
PRPF4-201ENST00000374198 RBM39Q14498 530 aaKnown RBP11.89□□□□□ -0.51
PRPF4-201ENST00000374198 C11orf87Q6NUJ2 197 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 PSRC1Q6PGN9 363 aaPredicted RBP11.89□□□□□ -0.51
PRPF4-201ENST00000374198 RFLNAQ6ZTI6 216 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 GAREM2Q75VX8 874 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 NRMQ8IXM6 262 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 DMRTC2Q8IXT2 367 aaPredicted RBP11.89□□□□□ -0.51
PRPF4-201ENST00000374198 GJD3Q8N144 294 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 RAB40AQ8WXH6 277 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 SLC39A7Q92504 469 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 KLK6Q92876 244 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 GFI1Q99684 422 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 GGACTQ9BVM4 153 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 CHST6Q9GZX3 395 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 IL21RQ9HBE5 538 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 ZNF705EA8MWA4 302 aaPredicted RBP11.89□□□□□ -0.51
PRPF4-201ENST00000374198 F5H0A9 414 aaPredicted RBP11.89□□□□□ -0.51
PRPF4-201ENST00000374198 FRS3O43559 492 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 FARS2O95363 451 aaKnown RBP11.89□□□□□ -0.51
PRPF4-201ENST00000374198 FGBP02675 491 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 ANXA2P07355 339 aaKnown RBP11.89□□□□□ -0.51
PRPF4-201ENST00000374198 SLC25A4P12235 298 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 CKBP12277 381 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 SLC16A1P53985 500 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 TAS2R20P59543 309 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 RPS11P62280 158 aaKnown RBP eCLIP11.89□□□□□ -0.51
PRPF4-201ENST00000374198 PCGF3Q3KNV8 242 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 ZNF311Q5JNZ3 666 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 PWWP2BQ6NUJ5 590 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 DNM1P46Q6ZS02 220 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 ACOT7LQ6ZUV0 252 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 SSX9Q7RTT3 188 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 TMEM200AQ86VY9 491 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 HS6ST3Q8IZP7 471 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 C15orf40Q8WUR7 153 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 TEAD3Q99594 435 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 SEPT5Q99719 369 aaPredicted RBP11.89□□□□□ -0.51
PRPF4-201ENST00000374198 NAA11Q9BSU3 229 aaPredicted RBP11.89□□□□□ -0.51
PRPF4-201ENST00000374198 C8orf33Q9H7E9 229 aaPredicted RBP11.89□□□□□ -0.51
PRPF4-201ENST00000374198 BCL2L10Q9HD36 194 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 APMAPQ9HDC9 416 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 DZANK1Q9NVP4 752 aa11.89□□□□□ -0.51
PRPF4-201ENST00000374198 RCC2Q9P258 522 aaKnown RBP11.89□□□□□ -0.51
PRPF4-201ENST00000374198 TRIP12Q14669 1992 aaPredicted RBP11.88□□□□□ -0.51
PRPF4-201ENST00000374198 SLC22A31A6NKX4 558 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 OGG1O15527 345 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 SLCO2B1O94956 709 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 CHRM4P08173 479 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 SBK2P0C263 348 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 SRMP19623 302 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 DLSTP36957 453 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 HTR5AP47898 357 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 CLDN12P56749 244 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 ST8SIA6P61647 398 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 PON3Q15166 354 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 DECR1Q16698 335 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 TMEM240Q5SV17 173 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 STPG1Q5TH74 334 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 CRTC1Q6UUV9 634 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 SZRD1Q7Z422 152 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 GLB1L2Q8IW92 636 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 HAVCR1Q96D42 359 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 MMP26Q9NRE1 261 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 TMEM100Q9NV29 134 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms