RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 H7BYZ3 331 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 DHPSP49366 369 aaPredicted RBP14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 RPS24P62847 133 aaKnown RBP14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 FCN2Q15485 313 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 ETFDHQ16134 617 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 TRNP1Q6NT89 227 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 HUS1BQ8NHY5 278 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 SLC35B2Q8TB61 432 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 CSAG2Q9Y5P2 127 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 MYOM1P52179 1685 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 N4BP2Q86UW6 1770 aaPredicted RBP14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 COL3A1P02461 1466 aaPredicted RBP14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 CCKARP32238 428 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 CTSL3PQ5NE16 218 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 OR4F15Q8NGB8 312 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 HERPUD2Q9BSE4 406 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 ATRNL1Q5VV63 1379 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 UNC13CQ8NB66 2214 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 FAM227AF5H4B4 570 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 POP7O75817 140 aaKnown RBP14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 TBPL1P62380 186 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 PDZD3Q86UT5 571 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 OR5AR1Q8NGP9 310 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 OR13D1Q8NGV5 346 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 ADM5C9JUS6 153 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 H3BQ06 376 aaPredicted RBP14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 NME4O00746 187 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 CD300LGQ6UXG3 332 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 MMP2P08253 660 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 TECRLQ5HYJ1 363 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 TMEM123Q8N131 208 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 APH1BQ8WW43 257 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 BORCS6Q96GS4 357 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 HELTA6NFD8 242 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 DDOSTP39656 456 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 PRRT3Q5FWE3 981 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 TMEM244Q5VVB8 128 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 C15orf52Q6ZUT6 534 aaKnown RBP14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 SLC38A6Q8IZM9 456 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 POPDC3Q9HBV1 291 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 M0R3H8 397 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 ALPLP05186 524 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 CD1DP15813 335 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 SRPXP78539 464 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 THEM4Q5T1C6 240 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 ABLIM2Q6H8Q1 611 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 OTOP2Q7RTS6 562 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 TMEM19Q96HH6 336 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 CTDSP1Q9GZU7 261 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 WWTR1Q9GZV5 400 aa14.34□□□□□ -0.11
GTF3C4-201ENST00000372146 STAG3L2P0CL84 134 aa14.33□□□□□ -0.11
GTF3C4-201ENST00000372146 DTYMKP23919 212 aa14.33□□□□□ -0.11
GTF3C4-201ENST00000372146 PCGF2P35227 344 aa14.33□□□□□ -0.11
GTF3C4-201ENST00000372146 EMP2P54851 167 aa14.33□□□□□ -0.11
GTF3C4-201ENST00000372146 MFSD6LQ8IWD5 586 aa14.33□□□□□ -0.11
GTF3C4-201ENST00000372146 MYADMQ96S97 322 aa14.33□□□□□ -0.11
GTF3C4-201ENST00000372146 DDX31Q9H8H2 851 aaKnown RBP14.33□□□□□ -0.11
GTF3C4-201ENST00000372146 RAB18Q9NP72 206 aa14.33□□□□□ -0.11
GTF3C4-201ENST00000372146 ACSS1Q9NUB1 689 aaPredicted RBP14.33□□□□□ -0.11
GTF3C4-201ENST00000372146 ZNF281Q9Y2X9 895 aa14.33□□□□□ -0.11
GTF3C4-201ENST00000372146 HSD17B6O14756 317 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 HMGCLP35914 325 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 GPLD1P80108 840 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 LTC4SQ16873 150 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 C2orf27AQ580R0 203 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 SLC35D2Q76EJ3 337 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 ECHDC3Q96DC8 303 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 EGLN3Q9H6Z9 239 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 TLE6Q9H808 572 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 ANKRD30BLA7E2S9 258 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 RAB27BO00194 218 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 GPR39O43194 453 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 PTBP1P26599 531 aaKnown RBP eCLIP14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 GTDC1Q4AE62 458 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 PLEKHS1Q5SXH7 462 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 FAM69BQ5VUD6 431 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 LANCL3Q6ZV70 420 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 DTWD1Q8N5C7 304 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 OR1A2Q9Y585 309 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 KCTD3Q9Y597 815 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 WNT7AO00755 349 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 PMCHP20382 165 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 VARS2Q5ST30 1063 aaKnown RBP14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 EXOGQ9Y2C4 368 aaKnown RBP14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 SLC43A1O75387 559 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 VEGFAP15692 232 aaPredicted RBP14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 ACRV1P26436 265 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 CRABP1P29762 137 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 PMS2P11Q13670 270 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 ZNF322Q6U7Q0 402 aaPredicted RBP14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 OVCH1Q7RTY7 1134 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 OR9A2Q8NGT5 310 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 SFXN2Q96NB2 322 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 NMES1Q9C002 83 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 EIF4EP06730 217 aaKnown RBP14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 CD80P33681 288 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 FABP9Q0Z7S8 132 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 ZNF813Q6ZN06 617 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 RHEBL1Q8TAI7 183 aa14.33□□□□□ -0.12
GTF3C4-201ENST00000372146 OR5B2Q96R09 309 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms