RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 YAE1D1Q9NRH1 226 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 PKP3Q9Y446 797 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 TSSC4Q9Y5U2 329 aaPredicted RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 EML6Q6ZMW3 1958 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 A0A0A6YYD5 115 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 A0A1W2PP18 115 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 OR51F1A6NGY5 319 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 BCKDKO14874 412 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 ACOX3O15254 700 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 STX11O75558 287 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 FTH1P02794 183 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 MELTFP08582 738 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 GNAO1P09471 354 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 NR2C1P13056 603 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 HOXB2P14652 356 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 ZNF28P17035 718 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 AMD1P17707 334 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 GPX2P18283 190 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 BMP5P22003 454 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 FBLP22087 321 aaKnown RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 LOXP28300 417 aaPredicted RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 RASSF2P50749 326 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 F2RL1P55085 397 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 PCBP3P57721 371 aaKnown RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 TAS2R60P59551 318 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 RPL11P62913 178 aaKnown RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 NTHL1P78549 312 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 RAD51Q06609 339 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 TRAM2Q15035 370 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 MLF2Q15773 248 aaPredicted RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 SMN1Q16637 294 aaKnown RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 TRMT5Q32P41 509 aaKnown RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 BSXQ3C1V8 233 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 RUNDC3AQ59EK9 446 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 TCHHL1Q5QJ38 904 aaPredicted RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 FHL5Q5TD97 284 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 ZNF691Q5VV52 312 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 PARM1Q6UWI2 310 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 MRGPREQ86SM8 312 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 SERPINA11Q86U17 422 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 ALYREFQ86V81 257 aaKnown RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 CRLF3Q8IUI8 442 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 VRK3Q8IV63 474 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 APLFQ8IW19 511 aaPredicted RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 C2orf73Q8N5S3 287 aaPredicted RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 TTC29Q8NA56 475 aaPredicted RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 PROKR2Q8NFJ6 384 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 FAM3CQ92520 227 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 ZG16BQ96DA0 208 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 LGALS12Q96DT0 336 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 SMIM14Q96QK8 99 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 GPR21Q99679 349 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 TRIM15Q9C019 465 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 ALX4Q9H161 411 aaPredicted RBP3.54□□□□□ -1.84
MCF2-203ENST00000370576 MYNNQ9NPC7 610 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 CMTM6Q9NX76 183 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 DLL3Q9NYJ7 618 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 CSNK1G3Q9Y6M4 447 aa3.54□□□□□ -1.84
MCF2-203ENST00000370576 DOCK9Q9BZ29 2069 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 A0A1W2PQL4 384 aaPredicted RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 ZNF98A6NK75 572 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 ARHGEF33A8MVX0 844 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 E5RI56 91 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 CDC7O00311 574 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 NOS1APO75052 506 aaPredicted RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 FKBP6O75344 327 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 PMPCBO75439 489 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 CD1AP06126 327 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 ACADSP16219 412 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 ADPRHP54922 357 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 FOXA1P55317 472 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 DLX2Q07687 328 aaPredicted RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 SYT16Q17RD7 645 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 MICBQ29980 383 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 AASDHQ4L235 1098 aaPredicted RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 LAIR1Q6GTX8 287 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 ERASQ7Z444 233 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 TSEN54Q7Z6J9 526 aaKnown RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 LYG2Q86SG7 212 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 KLBQ86Z14 1044 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 SFTPA1Q8IWL2 248 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 METTL4Q8N3J2 472 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 BEND7Q8N7W2 519 aaPredicted RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 MDS2Q8NDY4 140 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 CATSPER1Q8NEC5 780 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 GTF2H4Q92759 462 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.53□□□□□ -1.84
MCF2-203ENST00000370576 CPNE4Q96A23 557 aaPredicted RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 MAPKAP1Q9BPZ7 522 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 NDC1Q9BTX1 674 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 PAPOLGQ9BWT3 736 aaKnown RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 TMEM38AQ9H6F2 299 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 DDX31Q9H8H2 851 aaKnown RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 SPATA2Q9UM82 520 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 PIGLQ9Y2B2 252 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 PTPRBP23467 1997 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 A0A096LPI6 279 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 C15orf65H3BRN8 121 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 MANBAO00462 879 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 AZIN1O14977 448 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms