RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 PAQR6Q6TCH4 344 aa13.3□□□□□ -0.28
SSR4-204ENST00000370087 FRRS1Q6ZNA5 592 aa13.3□□□□□ -0.28
SSR4-204ENST00000370087 C1orf229Q6ZS94 237 aaPredicted RBP13.3□□□□□ -0.28
SSR4-204ENST00000370087 C16orf62Q7Z3J2 963 aa13.3□□□□□ -0.28
SSR4-204ENST00000370087 SPATA21Q7Z572 469 aa13.3□□□□□ -0.28
SSR4-204ENST00000370087 PEG10Q86TG7 708 aaKnown RBP13.3□□□□□ -0.28
SSR4-204ENST00000370087 GLCCI1Q86VQ1 547 aa13.3□□□□□ -0.28
SSR4-204ENST00000370087 NUP37Q8NFH4 326 aa13.3□□□□□ -0.28
SSR4-204ENST00000370087 AENQ8WTP8 325 aaKnown RBP13.3□□□□□ -0.28
SSR4-204ENST00000370087 FAM216AQ8WUB2 273 aa13.3□□□□□ -0.28
SSR4-204ENST00000370087 WDR60Q8WVS4 1066 aa13.3□□□□□ -0.28
SSR4-204ENST00000370087 RAB8BQ92930 207 aa13.3□□□□□ -0.28
SSR4-204ENST00000370087 NAA11Q9BSU3 229 aaPredicted RBP13.3□□□□□ -0.28
SSR4-204ENST00000370087 OBP2BQ9NPH6 170 aa13.3□□□□□ -0.28
SSR4-204ENST00000370087 HIF1ANQ9NWT6 349 aa13.3□□□□□ -0.28
SSR4-204ENST00000370087 RAB21Q9UL25 225 aa13.3□□□□□ -0.28
SSR4-204ENST00000370087 SLC35A3Q9Y2D2 325 aa13.3□□□□□ -0.28
SSR4-204ENST00000370087 SPEF1Q9Y4P9 236 aa13.3□□□□□ -0.28
SSR4-204ENST00000370087 ARPC4-TTLL3A0A0A6YYG9 625 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 TMEM114B3SHH9 223 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 B4DSR2 109 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 EIF1BO60739 113 aaKnown RBP13.29□□□□□ -0.28
SSR4-204ENST00000370087 UPK3AO75631 287 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 ADRA2AP08913 450 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 OR12D1P0DN82 309 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 NPR2P20594 1047 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 TACR3P29371 465 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 RPL3P39023 403 aaKnown RBP13.29□□□□□ -0.28
SSR4-204ENST00000370087 P2RY4P51582 365 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 HILS1P60008 231 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 IL1RL1Q01638 556 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 CCDC153Q494R4 210 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 AP1ARQ63HQ0 302 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 CCDC63Q8NA47 563 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 POMGNT2Q8NAT1 580 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 CLDND2Q8NHS1 167 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 AGR3Q8TD06 166 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 DUSP26Q9BV47 211 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 SAP130Q9H0E3 1048 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 ZNF442Q9H7R0 627 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 EXOSC3Q9NQT5 275 aaKnown RBP13.29□□□□□ -0.28
SSR4-204ENST00000370087 ATAD3AQ9NVI7 634 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 TMEM45AQ9NWC5 275 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 PCDHGB4Q9UN71 923 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 WDR45Q9Y484 360 aa13.29□□□□□ -0.28
SSR4-204ENST00000370087 ZNF208O43345 1280 aa13.28□□□□□ -0.28
SSR4-204ENST00000370087 CHEK2O96017 543 aa13.28□□□□□ -0.28
SSR4-204ENST00000370087 IGKV3-15P01624 115 aa13.28□□□□□ -0.28
SSR4-204ENST00000370087 POLR2HP52434 150 aaKnown RBP13.28□□□□□ -0.28
SSR4-204ENST00000370087 ARFIP2P53365 341 aa13.28□□□□□ -0.28
SSR4-204ENST00000370087 UBE2NP61088 152 aaKnown RBP13.28□□□□□ -0.28
SSR4-204ENST00000370087 CEACAM7Q14002 265 aa13.28□□□□□ -0.28
SSR4-204ENST00000370087 OR7A5Q15622 319 aa13.28□□□□□ -0.28
SSR4-204ENST00000370087 ELFN2Q5R3F8 820 aa13.28□□□□□ -0.28
SSR4-204ENST00000370087 PRR31Q5SQ13 230 aa13.28□□□□□ -0.28
SSR4-204ENST00000370087 IL23RQ5VWK5 629 aa13.28□□□□□ -0.28
SSR4-204ENST00000370087 TNFAIP8L2Q6P589 184 aaPredicted RBP13.28□□□□□ -0.28
SSR4-204ENST00000370087 GPAT4Q86UL3 456 aa13.28□□□□□ -0.28
SSR4-204ENST00000370087 ARFGAP2Q8N6H7 521 aa13.28□□□□□ -0.28
SSR4-204ENST00000370087 OR4F15Q8NGB8 312 aa13.28□□□□□ -0.28
SSR4-204ENST00000370087 CKAP2Q8WWK9 683 aa13.28□□□□□ -0.28
SSR4-204ENST00000370087 TMEM186Q96B77 213 aa13.28□□□□□ -0.28
SSR4-204ENST00000370087 DDIT4LQ96D03 193 aa13.28□□□□□ -0.28
SSR4-204ENST00000370087 DYNLRB1Q9NP97 96 aa13.28□□□□□ -0.28
SSR4-204ENST00000370087 PCDHB14Q9Y5E9 798 aa13.28□□□□□ -0.28
SSR4-204ENST00000370087 IGHV2OR16-5A0A0B4J2B6 119 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 LIPT2A6NK58 231 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 AQP7P3A6NL99 342 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 DUXAA6NLW8 204 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 ZNF587BE7ETH6 402 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 AVPP01185 164 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 NUDT17P0C025 328 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 FKBP2P26885 142 aaKnown RBP13.27□□□□□ -0.29
SSR4-204ENST00000370087 MAPK1P28482 360 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 ARRB2P32121 409 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 CRHR1P34998 444 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 KCNJ10P78508 379 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 C3orf36Q3SXR2 165 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 PDLIM3Q53GG5 364 aaPredicted RBP13.27□□□□□ -0.29
SSR4-204ENST00000370087 AWAT1Q58HT5 328 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 C6orf136Q5SQH8 315 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 OR4F3Q6IEY1 312 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 RIBC1Q8N443 379 aaPredicted RBP13.27□□□□□ -0.29
SSR4-204ENST00000370087 MREGQ8N565 214 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 MIPOL1Q8TD10 442 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 ZNF418Q8TF45 676 aaPredicted RBP13.27□□□□□ -0.29
SSR4-204ENST00000370087 ROPN1LQ96C74 230 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 PPP3R2Q96LZ3 170 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 LRRC37BQ96QE4 947 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 RACGAP1Q9H0H5 632 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 ESM1Q9NQ30 184 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 PCDHB10Q9UN67 800 aa13.27□□□□□ -0.29
SSR4-204ENST00000370087 LOC105371242A0A075B767 164 aa13.26□□□□□ -0.29
SSR4-204ENST00000370087 OR6C65A6NJZ3 312 aa13.26□□□□□ -0.29
SSR4-204ENST00000370087 LYPLA1O75608 230 aaPredicted RBP13.26□□□□□ -0.29
SSR4-204ENST00000370087 KRT33AO76009 404 aa13.26□□□□□ -0.29
SSR4-204ENST00000370087 HPXP02790 462 aa13.26□□□□□ -0.29
SSR4-204ENST00000370087 MSMBP08118 114 aa13.26□□□□□ -0.29
SSR4-204ENST00000370087 FGF4P08620 206 aa13.26□□□□□ -0.29
SSR4-204ENST00000370087 EPHA1P21709 976 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms