RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 PARP8Q8N3A8 854 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 DNAJC9Q8WXX5 260 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 PNPLA2Q96AD5 504 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 CNTNAP3BQ96NU0 1288 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 TNFRSF13CQ96RJ3 184 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 CNTNAP3Q9BZ76 1288 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 EGLN3Q9H6Z9 239 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 TNFRSF10DQ9UBN6 386 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 REV1Q9UBZ9 1251 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 IL20RAQ9UHF4 553 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 CACNA1BQ00975 2339 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 NPIPA5E9PKD4 350 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 BGLAPP02818 100 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 IMPDH2P12268 514 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 OSMP13725 252 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 POU3F2P20265 443 aaPredicted RBP9.85□□□□□ -0.83
BRCC3-204ENST00000369462 CHMP24386 653 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 IDUAP35475 653 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 CLK1P49759 484 aaKnown RBP9.85□□□□□ -0.83
BRCC3-204ENST00000369462 OR7A5Q15622 319 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 NHSL2Q5HYW2 709 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 TRILQ7L0X0 811 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 DEPDC4Q8N2C3 294 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 TEX19Q8NA77 164 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 NEIL3Q8TAT5 605 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 CYGBQ8WWM9 190 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 RDH12Q96NR8 316 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 NPIPA1Q9UND3 350 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 SIGLEC7Q9Y286 467 aa9.85□□□□□ -0.83
BRCC3-204ENST00000369462 RP1L1Q8IWN7 2480 aaPredicted RBP9.84□□□□□ -0.83
BRCC3-204ENST00000369462 TRGV5A0A0B4J1U4 118 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 A0A0J9YW62 118 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 BLOC1S5-TXNDC5H3BN57 136 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 LINC01387J3KSC0 135 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 TP53P04637 393 aaPredicted RBP9.84□□□□□ -0.83
BRCC3-204ENST00000369462 BMP7P18075 431 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 NUP107P57740 925 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 FOXK2Q01167 660 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 ZBED5Q49AG3 693 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 C6orf52Q5T4I8 152 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 Q6ZPB1 254 aaPredicted RBP9.84□□□□□ -0.83
BRCC3-204ENST00000369462 RASSF6Q6ZTQ3 369 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 KIF18BQ86Y91 864 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 DHRSXQ8N5I4 330 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 KLHL15Q96M94 604 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 MBOAT4Q96T53 435 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 TAPBPLQ9BX59 468 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 FKRPQ9H9S5 495 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 SEC14L4Q9UDX3 406 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 HDGFL3Q9Y3E1 203 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 LIPT2A6NK58 231 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 GJE1A6NN92 205 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 FTCDNL1E5RQL4 147 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 SULT2B1O00204 365 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 EIF1AYO14602 144 aaKnown RBP9.84□□□□□ -0.83
BRCC3-204ENST00000369462 MT-ATP6P00846 226 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 HIST1H2ABP04908 130 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 ASAH2BP0C7U1 165 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 GRPRP30550 384 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 DIO1P49895 249 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 CLEC12AQ5QGZ9 265 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 ZNF620Q6ZNG0 422 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 TMPPEQ6ZT21 453 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 HIST3H2AQ7L7L0 130 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 MAMDC2Q7Z304 686 aaPredicted RBP9.84□□□□□ -0.83
BRCC3-204ENST00000369462 Q8NA96 180 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 MFSD8Q8NHS3 518 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 HIST1H2ACQ93077 130 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 ABTB1Q969K4 478 aaPredicted RBP9.84□□□□□ -0.83
BRCC3-204ENST00000369462 ADI1Q9BV57 179 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 PLA2G12AQ9BZM1 189 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 SLC25A18Q9H1K4 315 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 FAM118AQ9NWS6 357 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 IL20Q9NYY1 176 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 ENOPH1Q9UHY7 261 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 ZNF229Q9UJW7 825 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 AP4B1Q9Y6B7 739 aa9.84□□□□□ -0.83
BRCC3-204ENST00000369462 M0R082 166 aa9.83□□□□□ -0.84
BRCC3-204ENST00000369462 TNFSF11O14788 317 aa9.83□□□□□ -0.84
BRCC3-204ENST00000369462 PTP4A3O75365 173 aa9.83□□□□□ -0.84
BRCC3-204ENST00000369462 GTF2E2P29084 291 aaKnown RBP9.83□□□□□ -0.84
BRCC3-204ENST00000369462 SLC9A3P48764 834 aa9.83□□□□□ -0.84
BRCC3-204ENST00000369462 LHX2P50458 406 aa9.83□□□□□ -0.84
BRCC3-204ENST00000369462 SUCLG1P53597 346 aaKnown RBP9.83□□□□□ -0.84
BRCC3-204ENST00000369462 CRISP1P54107 249 aa9.83□□□□□ -0.84
BRCC3-204ENST00000369462 OR2B6P58173 313 aa9.83□□□□□ -0.84
BRCC3-204ENST00000369462 FXYD6P3P58550 94 aa9.83□□□□□ -0.84
BRCC3-204ENST00000369462 ESRRGP62508 458 aa9.83□□□□□ -0.84
BRCC3-204ENST00000369462 SRYQ05066 204 aa9.83□□□□□ -0.84
BRCC3-204ENST00000369462 FHL1Q13642 323 aa9.83□□□□□ -0.84
BRCC3-204ENST00000369462 PTGES3Q15185 160 aaKnown RBP9.83□□□□□ -0.84
BRCC3-204ENST00000369462 INAQ16352 499 aa9.83□□□□□ -0.84
BRCC3-204ENST00000369462 TMEM236Q5W0B7 351 aa9.83□□□□□ -0.84
BRCC3-204ENST00000369462 GGNQ86UU5 652 aa9.83□□□□□ -0.84
BRCC3-204ENST00000369462 ZNF417Q8TAU3 575 aa9.83□□□□□ -0.84
BRCC3-204ENST00000369462 FANK1Q8TC84 345 aa9.83□□□□□ -0.84
BRCC3-204ENST00000369462 LIPHQ8WWY8 451 aa9.83□□□□□ -0.84
BRCC3-204ENST00000369462 MIB2Q96AX9 1013 aa9.83□□□□□ -0.84
BRCC3-204ENST00000369462 SAMD8Q96LT4 415 aa9.83□□□□□ -0.84
BRCC3-204ENST00000369462 ZNF587Q96SQ5 575 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms