RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 CADM1Q9BY67 442 aaKnown RBP4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 PANK2Q9BZ23 570 aa4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 YIPF3Q9GZM5 350 aa4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 ALX4Q9H161 411 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 CPVLQ9H3G5 476 aa4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 WDR54Q9H977 334 aa4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 UBTD1Q9HAC8 227 aa4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 ZDHHC4Q9NPG8 344 aa4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 GID8Q9NWU2 228 aa4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 MARCH5Q9NX47 278 aa4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 SPHK1Q9NYA1 384 aa4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 KIAA1456Q9P272 454 aa4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 COPS7AQ9UBW8 275 aa4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 MRM2Q9UI43 246 aaKnown RBP4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 PHF11Q9UIL8 331 aa4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 ANAPC7Q9UJX3 599 aa4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 DIMT1Q9UNQ2 313 aaKnown RBP4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 PPP1R3CQ9UQK1 317 aa4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 MMACHCQ9Y4U1 282 aa4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 CELSR2Q9HCU4 2923 aa4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 MYLKQ15746 1914 aa4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 CEP192Q8TEP8 1941 aa4.58□□□□□ -1.68
ECHDC1-204ENST00000368292 ABCA2Q9BZC7 2435 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 CRYBG3Q68DQ2 2970 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 KNTC1P50748 2209 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 MED13LQ71F56 2210 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 PDZD2O15018 2839 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 HIVEP1P15822 2718 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 PLXND1Q9Y4D7 1925 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 A0A1B0GVL5 298 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 A0A1W2PPQ1 181 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 A0A1W2PQL4 384 aaPredicted RBP4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 SLC5A10A0PJK1 596 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 TMEM213A2RRL7 107 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 F8W036 122 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 H7C0C1 242 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 M0QZ92 97 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 PDXKO00764 312 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 RAB29O14966 203 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 CCL16O15467 120 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 RS1O15537 224 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 CTNSO60931 367 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 RNF224P0DH78 156 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 SAGP10523 405 aaPredicted RBP4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 IRF1P10914 325 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 SLC2A1P11166 492 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 ETS2P15036 469 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 ST6GAL1P15907 406 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 CD36P16671 472 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 ME2P23368 584 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 PPP2R1BP30154 601 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 CDAP32320 146 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 CDH5P33151 784 aaPredicted RBP4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 ID1P41134 155 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 MAP3K8P41279 467 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 IER3P46695 156 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 NUMBP49757 651 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 RGS6P49758 472 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 ZNF75DP51815 510 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 PKNOX1P55347 436 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 SIRPAP78324 504 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 MYL7Q01449 175 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 SRSF4Q08170 494 aaKnown RBP4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 ORC2Q13416 577 aaPredicted RBP4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 KEAP1Q14145 624 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 GK2Q14410 553 aaPredicted RBP4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 TOMM34Q15785 309 aaPredicted RBP4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 RPE65Q16518 533 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 ZNF699Q32M78 642 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 CXorf66Q5JRM2 361 aaPredicted RBP4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 FAM78AQ5JUQ0 283 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 DCAF12L2Q5VW00 463 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 LYSMD4Q5XG99 296 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 ARMCX5Q6P1M9 558 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 NIPAL3Q6P499 406 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 BHLHB9Q6PI77 547 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 KCNIP4Q6PIL6 250 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 FAM159AQ6UWV7 190 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 ZNF562Q6V9R5 426 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 ASCL4Q6XD76 172 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 CERS6Q6ZMG9 384 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 DEF8Q6ZN54 512 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 RBM44Q6ZP01 1051 aaKnown RBP4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 MRPL21Q7Z2W9 205 aaKnown RBP4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 CRLF3Q8IUI8 442 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 FUNDC1Q8IVP5 155 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 CPXM2Q8N436 756 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 PNLDC1Q8NA58 520 aaKnown RBP4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 OR2L5Q8NG80 312 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 OR2V1Q8NHB1 315 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 NANPQ8TBE9 248 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 ZNF398Q8TD17 642 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 GIPC3Q8TF64 312 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 RNF133Q8WVZ7 376 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 TCEAL4Q96EI5 215 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 OTUB1Q96FW1 271 aaPredicted RBP4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 MUS81Q96NY9 551 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 WFIKKN1Q96NZ8 548 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 FCRL5Q96RD9 977 aa4.57□□□□□ -1.68
ECHDC1-204ENST00000368292 SLC30A2Q9BRI3 323 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms