RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 CCNB1IP1Q9NPC3 277 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 TIMMDC1Q9NPL8 285 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 STMN3Q9NZ72 180 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 AASSQ9UDR5 926 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 HRH3Q9Y5N1 445 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 MED13Q9UHV7 2174 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 CREBBPQ92793 2442 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 NCKAP5O14513 1909 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 KIAA1549Q9HCM3 1950 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 B4DXG7 233 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 XPNPEP2O43895 674 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 PTP4A3O75365 173 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 MT-ATP6P00846 226 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 MAP2K6P52564 334 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 FXYD6P3P58550 94 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 MEDAGQ5VYS4 303 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 ZNF773Q6PK81 442 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 WDSUB1Q8N9V3 476 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 PSD4Q8NDX1 1056 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 OR51A7Q8NH64 312 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 IPCEF1Q8WWN9 437 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 C1GALT1C1Q96EU7 318 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 UTP23Q9BRU9 249 aaKnown RBP12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 IFT27Q9BW83 186 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 UBQLN3Q9H347 655 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 OCEL1Q9H607 264 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 FKRPQ9H9S5 495 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 MCCC2Q9HCC0 563 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 VCX3AQ9NNX9 186 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 NANSQ9NR45 359 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 PLCXD1Q9NUJ7 323 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 ANKRD10Q9NXR5 420 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 CHRNA9Q9UGM1 479 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 ZNF229Q9UJW7 825 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 FBXL2Q9UKC9 423 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 SNX5Q9Y5X3 404 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 SPIN1Q9Y657 262 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 ABCA12Q86UK0 2595 aa12.53□□□□□ -0.4
PDLIM5-203ENST00000359265 TRIM64CA6NLI5 447 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 BHLHE40O14503 412 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 ZNF208O43345 1280 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 PRKYO43930 277 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 MRPS14O60783 128 aaKnown RBP12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 BGLAPP02818 100 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 HIST1H2ABP04908 130 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 WT1P19544 449 aaPredicted RBP12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 EIF1P41567 113 aaKnown RBP12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 RPS5P46782 204 aaKnown RBP12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 NR1H2P55055 460 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 PRPS1P60891 318 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 RPS4XP62701 263 aaKnown RBP12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 OCLNQ16625 522 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 SMN1Q16637 294 aaKnown RBP12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 TMEM44Q2T9K0 475 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 FAM69AQ5T7M9 428 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 AGAP7PQ5VUJ5 663 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 C1orf140Q5VVS0 124 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 TIGD3Q6B0B8 471 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 HIST2H2BCQ6DN03 193 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 ARHGAP11AQ6P4F7 1023 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 THSD4Q6ZMP0 1018 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 CCDC81Q6ZN84 652 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 HIST3H2AQ7L7L0 130 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 MAMDC2Q7Z304 686 aaPredicted RBP12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 MDGA2Q7Z553 956 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 NANOGNBQ7Z5D8 188 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 LSRQ86X29 649 aaPredicted RBP12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 LNX2Q8N448 690 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 FAM26EQ8N5C1 309 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 OR6S1Q8NH40 331 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 TMEM163Q8TC26 289 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 HIST1H2ACQ93077 130 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 ZBTB8AQ96BR9 441 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 DDIT4LQ96D03 193 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 KTI12Q96EK9 354 aaPredicted RBP12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 JSRP1Q96MG2 331 aaPredicted RBP12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 AGAP4Q96P64 663 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 TNFRSF13CQ96RJ3 184 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 PROK2Q9HC23 129 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 SERINC1Q9NRX5 453 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 LRFN1Q9P244 771 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 IL20RAQ9UHF4 553 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 DKKL1Q9UK85 242 aa12.52□□□□□ -0.41
PDLIM5-203ENST00000359265 ZC3H12DA2A288 527 aaKnown RBP12.51□□□□□ -0.41
PDLIM5-203ENST00000359265 SNTNA6NMZ2 147 aa12.51□□□□□ -0.41
PDLIM5-203ENST00000359265 LRRN3E7EW58 273 aa12.51□□□□□ -0.41
PDLIM5-203ENST00000359265 G3V3Y1 287 aa12.51□□□□□ -0.41
PDLIM5-203ENST00000359265 SURF4O15260 269 aa12.51□□□□□ -0.41
PDLIM5-203ENST00000359265 EFSO43281 561 aa12.51□□□□□ -0.41
PDLIM5-203ENST00000359265 TLX2O43763 284 aaPredicted RBP12.51□□□□□ -0.41
PDLIM5-203ENST00000359265 OR2T1O43869 369 aa12.51□□□□□ -0.41
PDLIM5-203ENST00000359265 NPIPB7O75200 414 aa12.51□□□□□ -0.41
PDLIM5-203ENST00000359265 TRIM3O75382 744 aaPredicted RBP12.51□□□□□ -0.41
PDLIM5-203ENST00000359265 PPP1R3DO95685 299 aa12.51□□□□□ -0.41
PDLIM5-203ENST00000359265 FREM3P0C091 2139 aa12.51□□□□□ -0.41
PDLIM5-203ENST00000359265 ASAH2BP0C7U1 165 aa12.51□□□□□ -0.41
PDLIM5-203ENST00000359265 DPP4P27487 766 aa12.51□□□□□ -0.41
PDLIM5-203ENST00000359265 ADH6P28332 368 aa12.51□□□□□ -0.41
PDLIM5-203ENST00000359265 CD96P40200 585 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms