RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 TSPAN31Q12999 210 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 SNTB1Q13884 538 aaKnown RBP8.19□□□□□ -1.1
COL6A6-201ENST00000358511 ADAM5Q6NVV9 412 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 ACOT7LQ6ZUV0 252 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 PRRT2Q7Z6L0 340 aaPredicted RBP8.19□□□□□ -1.1
COL6A6-201ENST00000358511 GHSRQ92847 366 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 MBOAT4Q96T53 435 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 TOLLIPQ9H0E2 274 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 SEMA6CQ9H3T2 930 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 EGLN3Q9H6Z9 239 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 C5AR2Q9P296 337 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 HHLA2Q9UM44 414 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 VSTM2BA6NLU5 285 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 ARAFP10398 606 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 CR2P20023 1033 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 LAP3P28838 519 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 GGTA1PQ4G0N0 100 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 CDS1Q92903 461 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 TBC1D20Q96BZ9 403 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 IER3IP1Q9Y5U9 82 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 DOCK8Q8NF50 2099 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 CPED1A4D0V7 1026 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 PPP5D1E7EU14 171 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 OR2T7P0C7T2 308 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 MGMTP16455 207 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 POU3F4P49335 361 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 INHBEP58166 350 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 RANP62826 216 aaKnown RBP8.19□□□□□ -1.1
COL6A6-201ENST00000358511 SPOCK1Q08629 439 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 MALLQ13021 153 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 OR2T27Q8NH04 317 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 OR4K15Q8NH41 348 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 OR52N1Q8NH53 320 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 C20orf24Q9BUV8 137 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 GABARAPL3Q9BY60 117 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 SLC23A1Q9UHI7 598 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 TNFSF12O43508 249 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 TMEM225BP0DP42 221 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 PGCP20142 388 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 SERPINA2P20848 420 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 PAX6P26367 422 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 MPPED2Q15777 294 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 MPEG1Q2M385 716 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 IGSF11Q5DX21 431 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 KHDC1LQ5JSQ8 128 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 STEAP1BQ6NZ63 245 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 KLHDC8AQ8IYD2 350 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 LSMEM1Q8N8F7 131 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 C2orf72A6NCS6 295 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 SNCGO76070 127 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 JTBO76095 146 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 MT-ND4LP03901 98 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 ETV5P41161 510 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 SIRPAP78324 504 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 SGCAQ16586 387 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 CLLU1Q5K131 121 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 APH1BQ8WW43 257 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 BOCQ9BWV1 1114 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 KCNIP1Q9NZI2 227 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 SLC22A7Q9Y694 548 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 A0A1B0GUH1 482 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 MROH6A6NGR9 719 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 ARGFXA6NJG6 315 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 J3KTA2 159 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 GYPBP06028 91 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 ACSM4P0C7M7 580 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 SPINT3P49223 89 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 PDZD11Q5EBL8 140 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 Q6ZVL8 140 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 MRPL10Q7Z7H8 261 aaKnown RBP8.19□□□□□ -1.1
COL6A6-201ENST00000358511 NANPQ8TBE9 248 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 IGSF8Q969P0 613 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 YIPF6Q96EC8 236 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 SLC6A20Q9NP91 592 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 HAO2Q9NYQ3 351 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 CEP250Q9BV73 2442 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 FREM3P0C091 2139 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 LEFTY1O75610 366 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 CFIP05156 583 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 FBXO45P0C2W1 286 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 STK19P49842 368 aaPredicted RBP8.19□□□□□ -1.1
COL6A6-201ENST00000358511 RAB1AP62820 205 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 ENTPD8Q5MY95 495 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 TBPL2Q6SJ96 375 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 ABHD4Q8TB40 342 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 KLHL42Q9P2K6 505 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 TP53TG5Q9Y2B4 290 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 NPFFR2Q9Y5X5 522 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 RTCAO00442 366 aaKnown RBP8.19□□□□□ -1.1
COL6A6-201ENST00000358511 TK1P04183 234 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 WASP42768 502 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 DAP3P51398 398 aaKnown RBP8.19□□□□□ -1.1
COL6A6-201ENST00000358511 TEKQ02763 1124 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 TLE1Q04724 770 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 GBX1Q14549 363 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 SMUG1Q53HV7 270 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 TMEM164Q5U3C3 297 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 SLCO4A1Q96BD0 722 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 SORBS1Q9BX66 1292 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms