RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 IKZF1Q13422 519 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 SIX1Q15475 284 aaPredicted RBP6.02□□□□□ -1.45
UPF2-201ENST00000356352 SSX2Q16385 188 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 EXT1Q16394 746 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 RNLSQ5VYX0 342 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 OR52W1Q6IF63 320 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 SLC46A3Q7Z3Q1 461 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 OR6V1Q8N148 313 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 NKAIN3Q8N8D7 197 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 OR2T27Q8NH04 317 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 ASB11Q8WXH4 323 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 PHYHIPQ92561 330 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 SLAMF9Q96A28 289 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 ZNF75AQ96N20 296 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 LINC00597Q9H2U6 94 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 OR51B6Q9H340 312 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 TUBG2Q9NRH3 451 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 TXNL4BQ9NX01 149 aaKnown RBP6.02□□□□□ -1.45
UPF2-201ENST00000356352 CORINQ9Y5Q5 1042 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 KCPQ6ZWJ8 1503 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 AIPO00170 330 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 RAD1O60671 282 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 CAPNS1P04632 268 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 PRSS56P0CW18 603 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 HLA-DOBP13765 273 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 GLB1P16278 677 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 PPP3CBP16298 524 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 MTCP1P56278 107 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 CLDN17P56750 224 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 RAC1P63000 192 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 PRDX1Q06830 199 aaKnown RBP6.02□□□□□ -1.45
UPF2-201ENST00000356352 IL10RAQ13651 578 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 HABP2Q14520 560 aaPredicted RBP6.02□□□□□ -1.45
UPF2-201ENST00000356352 GPR19Q15760 415 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 TBC1D28Q2M2D7 210 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 FAM74A1Q5RGS3 127 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 DLK2Q6UY11 383 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 ADAMTSL4Q6UY14 1074 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 ADIPOR2Q86V24 386 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 VRK2Q86Y07 508 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 GCNT2Q8N0V5 402 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 DRAXINQ8NBI3 349 aaPredicted RBP6.02□□□□□ -1.45
UPF2-201ENST00000356352 PAQR8Q8TEZ7 354 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 MITD1Q8WV92 249 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 NXPE3Q969Y0 559 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 MOCOSQ96EN8 888 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 TMEM59Q9BXS4 323 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 TWSG1Q9GZX9 223 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 OR52A5Q9H2C5 316 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 WDR76Q9H967 626 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 ARNT2Q9HBZ2 717 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 HRASLSQ9HDD0 168 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 NRIP3Q9NQ35 241 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 C1GALT1Q9NS00 363 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 PCDHGA1Q9Y5H4 931 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 GPR45Q9Y5Y3 372 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 CACNA1FO60840 1977 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 SERINC4A6NH21 518 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 TNFRSF10AO00220 468 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 GABRPO00591 440 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 SIGLEC6O43699 453 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 HPGDSO60760 199 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 TBPP20226 339 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 HTR2CP28335 458 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 GSK3AP49840 483 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 CLDN2P57739 230 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 GRB2P62993 217 aaKnown RBP6.02□□□□□ -1.45
UPF2-201ENST00000356352 YOD1Q5VVQ6 348 aaPredicted RBP6.02□□□□□ -1.45
UPF2-201ENST00000356352 HEPHL1Q6MZM0 1159 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 B3GLCTQ6Y288 498 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 MBOAT2Q6ZWT7 520 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 GAREM2Q75VX8 874 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 ADGRG5Q8IZF4 528 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 SPARTQ8N0X7 666 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 C15orf54Q8N8G6 183 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 HLA-CQ95604 372 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 RAB3CQ96E17 227 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 ZNF778Q96MU6 729 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 ARPC5LQ9BPX5 153 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 HDAC8Q9BY41 377 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 SMCO4Q9NRQ5 59 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 GNG12Q9UBI6 72 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 MRPS2Q9Y399 296 aaKnown RBP6.02□□□□□ -1.45
UPF2-201ENST00000356352 PCYT1BQ9Y5K3 369 aaPredicted RBP6.02□□□□□ -1.45
UPF2-201ENST00000356352 TCRBV3S1A0A5B6 114 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 CDC14CA4D256 554 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 SPINT2O43291 252 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 ONECUT3O60422 494 aaPredicted RBP6.02□□□□□ -1.45
UPF2-201ENST00000356352 AIFM1O95831 613 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 MT-ND4P03905 459 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 NAGAP17050 411 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 CST5P28325 142 aaPredicted RBP6.02□□□□□ -1.45
UPF2-201ENST00000356352 LGALS4P56470 323 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 UBE2G2P60604 165 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 SNRPD2P62316 118 aaKnown RBP6.02□□□□□ -1.45
UPF2-201ENST00000356352 NTHL1P78549 312 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 REEP5Q00765 189 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 ZP2Q05996 745 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 HNF4GQ14541 408 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 SLC35D3Q5M8T2 416 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms