RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 SYS1Q8N2H4 156 aa15.22■□□□□ 0.03
SAMM50-201ENST00000350028 LRRC75AQ8NAA5 344 aa15.22■□□□□ 0.03
SAMM50-201ENST00000350028 NAT6Q93015 286 aa15.22■□□□□ 0.03
SAMM50-201ENST00000350028 MRPL48Q96GC5 212 aaKnown RBP15.22■□□□□ 0.03
SAMM50-201ENST00000350028 PRMT8Q9NR22 394 aaPredicted RBP15.22■□□□□ 0.03
SAMM50-201ENST00000350028 RARRES3Q9UL19 164 aa15.22■□□□□ 0.03
SAMM50-201ENST00000350028 ZMIZ1Q9ULJ6 1067 aa15.22■□□□□ 0.03
SAMM50-201ENST00000350028 RP1P56715 2156 aa15.22■□□□□ 0.03
SAMM50-201ENST00000350028 BLOC1S5-TXNDC5H3BN57 136 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 CDC40O60508 579 aaKnown RBP eCLIP15.21■□□□□ 0.03
SAMM50-201ENST00000350028 APOA1P02647 267 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 ASAH2BP0C7U1 165 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 TDGF1P13385 188 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 SPI1P17947 270 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 ITPKBP27987 946 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 OR12D2P58182 307 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 ACTA2P62736 377 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 ACTG2P63267 376 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 EGR4Q05215 589 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 NKAIN1Q4KMZ8 207 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 MZT2AQ6P582 158 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 XKRXQ6PP77 449 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 ARL9Q6T311 187 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 SLC35F2Q8IXU6 374 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 OR8H2Q8N162 312 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 SETD6Q8TBK2 473 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 PIGKQ92643 395 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 EDAQ92838 391 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 MOGAT1Q96PD6 335 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 OR6C1Q96RD1 312 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 NMNAT3Q96T66 252 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 NEURL2Q9BR09 285 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 RTN4RQ9BZR6 473 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 SRRQ9GZT4 340 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 KLHL1Q9NR64 748 aa15.21■□□□□ 0.03
SAMM50-201ENST00000350028 IGHV5-10-1A0A0J9YXX1 117 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 E9PI62 339 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 FADS1O60427 444 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 TXNDC12O95881 172 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 ONECUT2O95948 504 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 TFP02787 698 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 HIST1H2ABP04908 130 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 HEXBP07686 556 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 GP1BBP13224 206 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 CXCR1P25024 350 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 SLC25A1P53007 311 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 CTXN1P60606 82 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 HSF2Q03933 536 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 LTBQ06643 244 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 DBPQ10586 325 aaPredicted RBP15.2■□□□□ 0.02
SAMM50-201ENST00000350028 GLYR1Q49A26 553 aaPredicted RBP15.2■□□□□ 0.02
SAMM50-201ENST00000350028 GXYLT1Q4G148 440 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 ALG10Q5BKT4 473 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 EMC4Q5J8M3 183 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 HIST3H2AQ7L7L0 130 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 ANKRD37Q7Z713 158 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 HIST1H2ACQ93077 130 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 KIAA1143Q96AT1 154 aaPredicted RBP15.2■□□□□ 0.02
SAMM50-201ENST00000350028 TMCO6Q96DC7 493 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 DIRAS2Q96HU8 199 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 SEMA4CQ9C0C4 833 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 FKRPQ9H9S5 495 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 FER1L5A0AVI2 2057 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 OR6C68A6NDL8 312 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 FABP12A6NFH5 140 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 OR6C70A6NIJ9 312 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 SCRG1O75711 98 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 GLCEO94923 617 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 DLGAP3O95886 979 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 UQCRC1P31930 480 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 P2RX1P51575 399 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 GBX2P52951 348 aaPredicted RBP15.2■□□□□ 0.02
SAMM50-201ENST00000350028 NRG3P56975 720 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 RNF4P78317 190 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 DCDP81605 110 aaKnown RBP15.2■□□□□ 0.02
SAMM50-201ENST00000350028 SIGLEC14Q08ET2 396 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 CBFBQ13951 182 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 EFR3AQ14156 821 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 ZNF79Q15937 498 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 DMKNQ6E0U4 476 aaPredicted RBP15.2■□□□□ 0.02
SAMM50-201ENST00000350028 FAM131AQ6UXB0 335 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 SHISA6Q6ZSJ9 500 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 FAM122BQ7Z309 247 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 JAZF1Q86VZ6 243 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 MS4A15Q8N5U1 240 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 GDPD1Q8N9F7 314 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 NFAM1Q8NET5 270 aaPredicted RBP15.2■□□□□ 0.02
SAMM50-201ENST00000350028 ABHD4Q8TB40 342 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 ZNF524Q96C55 264 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 RASD2Q96D21 266 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 Q96M85 177 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 ATF6BQ99941 703 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 SYNDIG1Q9H7V2 258 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 MOKQ9UQ07 419 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 SEC16AO15027 2179 aa15.2■□□□□ 0.02
SAMM50-201ENST00000350028 VPS13AQ96RL7 3174 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 DNAH14Q0VDD8 3507 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 TEX13CA0A0J9YWL9 993 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 SHISA3A0PJX4 238 aa15.19■□□□□ 0.02
SAMM50-201ENST00000350028 SMIM30A4D0T7 59 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms