RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 SEC22AQ96IW7 307 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 BTN2A3PQ96KV6 586 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 GPER1Q99527 375 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 CMSS1Q9BQ75 279 aaKnown RBP5.51□□□□□ -1.53
RFC1-201ENST00000349703 NIPAL2Q9H841 368 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 ANKRA2Q9H9E1 313 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 C12orf10Q9HB07 376 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 RBM22Q9NW64 420 aaKnown RBP eCLIP5.51□□□□□ -1.534e-18■■■■■ 95.2
RFC1-201ENST00000349703 MTCH1Q9NZJ7 389 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 GLS2Q9UI32 602 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 ZNF222Q9UK12 451 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 ZNF490Q9ULM2 529 aaPredicted RBP5.51□□□□□ -1.53
RFC1-201ENST00000349703 MEMO1Q9Y316 297 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 CCL27Q9Y4X3 112 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 OR1A2Q9Y585 309 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 MS4A18H0YCH9 400 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 OTCP00480 354 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 ATF6P18850 670 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 THBS2P35442 1172 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 IDH2P48735 452 aaKnown RBP5.51□□□□□ -1.53
RFC1-201ENST00000349703 TAF6P49848 677 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 CLCNKAP51800 687 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 MPPED2Q15777 294 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 ZNF792Q3KQV3 632 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 SLC39A12Q504Y0 691 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 RABL3Q5HYI8 236 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 SYT6Q5T7P8 510 aaPredicted RBP5.51□□□□□ -1.53
RFC1-201ENST00000349703 CASP12Q6UXS9 341 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 CREB3L2Q70SY1 520 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 TECPR1Q7Z6L1 1165 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 GPSM1Q86YR5 675 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 GTPBP8Q8N3Z3 284 aaPredicted RBP5.51□□□□□ -1.53
RFC1-201ENST00000349703 LINC00469Q8N7U9 141 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 OR5H6Q8NGV6 325 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 SPPL2AQ8TCT8 520 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 C2CD4CQ8TF44 421 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 SLC39A13Q96H72 371 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 DUSP15Q9H1R2 295 aaPredicted RBP5.51□□□□□ -1.53
RFC1-201ENST00000349703 SMURF2Q9HAU4 748 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 POPDC3Q9HBV1 291 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 G6PC2Q9NQR9 355 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 IL37Q9NZH6 218 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 CNIH4Q9P003 139 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 HSPB11Q9Y547 144 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 UGT2B17O75795 530 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 LCKP06239 509 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 SHMT2P34897 504 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 CCR5P51681 352 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 UGT2B15P54855 530 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 TAS2R46P59540 309 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 SLC10A2Q12908 348 aaPredicted RBP5.51□□□□□ -1.53
RFC1-201ENST00000349703 AKIRIN2Q53H80 203 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 C19orf54Q5BKX5 351 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 OR2T5Q6IEZ7 315 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 CPOQ8IVL8 374 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 FBXL14Q8N1E6 418 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 OR2T29Q8NH02 315 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 MR1Q95460 341 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 ERMAPQ96PL5 475 aaPredicted RBP5.51□□□□□ -1.53
RFC1-201ENST00000349703 ELOVL6Q9H5J4 265 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 SDR39U1Q9NRG7 319 aaPredicted RBP5.51□□□□□ -1.53
RFC1-201ENST00000349703 YIPF1Q9Y548 306 aa5.51□□□□□ -1.53
RFC1-201ENST00000349703 GLI3P10071 1580 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 ADAMDEC1O15204 470 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 GDF9O60383 454 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 ARHGEF15O94989 841 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 FARS2O95363 451 aaKnown RBP5.5□□□□□ -1.53
RFC1-201ENST00000349703 GP1BBP13224 206 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 CDKN2AP42771 156 aaKnown RBP5.5□□□□□ -1.53
RFC1-201ENST00000349703 CTSCP53634 463 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 FKBP1BP68106 108 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 VAMP3Q15836 100 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 GPR148Q8TDV2 347 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 MRPL38Q96DV4 380 aaKnown RBP5.5□□□□□ -1.53
RFC1-201ENST00000349703 PYURFQ96I23 114 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 SAMD8Q96LT4 415 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 TBX15Q96SF7 602 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 DEFB129Q9H1M3 183 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 EDA2RQ9HAV5 297 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 GCM1Q9NP62 436 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 AIG1Q9NVV5 245 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 B3GNT2Q9NY97 397 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 KLHL21Q9UJP4 597 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 LAMB2P55268 1798 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 NPIPB13A6NJU9 1138 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 ZNF726A6NNF4 738 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 NPIPB5A8MRT5 1133 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 NPIPB4C9JG80 1138 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 XPNPEP2O43895 674 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 OMPP47874 163 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 SELENOVP59797 346 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 DSC1Q08554 894 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 LIN54Q6MZP7 749 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 ACSM6Q6P461 480 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 PTOV1Q86YD1 416 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 KLHL36Q8N4N3 616 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 GDPD1Q8N9F7 314 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 SYT14Q8NB59 555 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 AGBL3Q8NEM8 1001 aa5.5□□□□□ -1.53
RFC1-201ENST00000349703 ARNTL2Q8WYA1 636 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms