RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 CPOQ8IVL8 374 aa16.91■□□□□ 0.3
PTN-201ENST00000348225 BEST3Q8N1M1 668 aa16.91■□□□□ 0.3
PTN-201ENST00000348225 WDSUB1Q8N9V3 476 aa16.91■□□□□ 0.3
PTN-201ENST00000348225 DDIT4LQ96D03 193 aa16.91■□□□□ 0.3
PTN-201ENST00000348225 CDCA4Q9BXL8 241 aa16.91■□□□□ 0.3
PTN-201ENST00000348225 LHPPQ9H008 270 aa16.91■□□□□ 0.3
PTN-201ENST00000348225 HINT3Q9NQE9 182 aaKnown RBP16.91■□□□□ 0.3
PTN-201ENST00000348225 SERINC1Q9NRX5 453 aa16.91■□□□□ 0.3
PTN-201ENST00000348225 FBXL2Q9UKC9 423 aa16.91■□□□□ 0.3
PTN-201ENST00000348225 SPIN1Q9Y657 262 aaPredicted RBP16.91■□□□□ 0.3
PTN-201ENST00000348225 ZC3H12DA2A288 527 aaKnown RBP16.9■□□□□ 0.3
PTN-201ENST00000348225 PRR23D1E9PI22 279 aaPredicted RBP16.9■□□□□ 0.3
PTN-201ENST00000348225 H3BSA7 217 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 ARPC3O15145 178 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 PRR23D2P0DMB1 279 aaPredicted RBP16.9■□□□□ 0.3
PTN-201ENST00000348225 ITGA3P26006 1051 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 CASRP41180 1078 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 MTNR1AP48039 350 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 CYB561P49447 251 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 RAB40BQ12829 278 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 TGIF1Q15583 401 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.9■□□□□ 0.3
PTN-201ENST00000348225 ALG10Q5BKT4 473 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 ZNF468Q5VIY5 522 aaPredicted RBP16.9■□□□□ 0.3
PTN-201ENST00000348225 ABHD17BQ5VST6 288 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 OTULINQ96BN8 352 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 ZBTB8AQ96BR9 441 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 NTNG2Q96CW9 530 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 RNFT2Q96EX2 444 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 CRELD1Q96HD1 420 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 TMEM41AQ96HV5 264 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 PTDSS2Q9BVG9 487 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 TAPBPLQ9BX59 468 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 NRIP3Q9NQ35 241 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 SACM1LQ9NTJ5 587 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 MRPS18AQ9NVS2 196 aaKnown RBP16.9■□□□□ 0.3
PTN-201ENST00000348225 IER3IP1Q9Y5U9 82 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 COMMD3-BMI1R4GMX3 469 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 CPAMD8Q8IZJ3 1885 aa16.9■□□□□ 0.3
PTN-201ENST00000348225 RIF1Q5UIP0 2472 aaKnown RBP16.9■□□□□ 0.3
PTN-201ENST00000348225 INMTO95050 263 aa16.89■□□□□ 0.29
PTN-201ENST00000348225 WISP1O95388 367 aa16.89■□□□□ 0.29
PTN-201ENST00000348225 RAB36O95755 333 aa16.89■□□□□ 0.29
PTN-201ENST00000348225 APEHP13798 732 aaKnown RBP16.89■□□□□ 0.29
PTN-201ENST00000348225 ADH6P28332 368 aa16.89■□□□□ 0.29
PTN-201ENST00000348225 HTR1FP30939 366 aa16.89■□□□□ 0.29
PTN-201ENST00000348225 UQCRC1P31930 480 aa16.89■□□□□ 0.29
PTN-201ENST00000348225 AQP2P41181 271 aa16.89■□□□□ 0.29
PTN-201ENST00000348225 IRF3Q14653 427 aa16.89■□□□□ 0.29
PTN-201ENST00000348225 MFSD13AQ14CX5 517 aa16.89■□□□□ 0.29
PTN-201ENST00000348225 INPP5JQ15735 1006 aaPredicted RBP16.89■□□□□ 0.29
PTN-201ENST00000348225 GXYLT1Q4G148 440 aa16.89■□□□□ 0.29
PTN-201ENST00000348225 UBE2UQ5VVX9 321 aa16.89■□□□□ 0.29
PTN-201ENST00000348225 PLBD1Q6P4A8 553 aa16.89■□□□□ 0.29
PTN-201ENST00000348225 IGFN1Q86VF2 1251 aa16.89■□□□□ 0.29
PTN-201ENST00000348225 CLVS1Q8IUQ0 354 aaPredicted RBP16.89■□□□□ 0.29
PTN-201ENST00000348225 OR1J4Q8NGS1 313 aa16.89■□□□□ 0.29
PTN-201ENST00000348225 MOSPD2Q8NHP6 518 aa16.89■□□□□ 0.29
PTN-201ENST00000348225 ASPNQ9BXN1 380 aa16.89■□□□□ 0.29
PTN-201ENST00000348225 STMN3Q9NZ72 180 aa16.89■□□□□ 0.29
PTN-201ENST00000348225 RSL24D1Q9UHA3 163 aaKnown RBP16.89■□□□□ 0.29
PTN-201ENST00000348225 NOL3O60936 208 aaKnown RBP16.88■□□□□ 0.29
PTN-201ENST00000348225 CD14P08571 375 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 TSPAN19P0C672 248 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 OC90Q02509 493 aaPredicted RBP16.88■□□□□ 0.29
PTN-201ENST00000348225 NHLH1Q02575 133 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 SYT6Q5T7P8 510 aaPredicted RBP16.88■□□□□ 0.29
PTN-201ENST00000348225 RNLSQ5VYX0 342 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 C3orf33Q6P1S2 294 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 NIPAL3Q6P499 406 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 OR5J2Q8NH18 312 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 ZNF420Q8TAQ5 688 aaPredicted RBP16.88■□□□□ 0.29
PTN-201ENST00000348225 SLC25A36Q96CQ1 311 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 KATNB1Q9BVA0 655 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 OR11A1Q9GZK7 315 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 PROK2Q9HC23 129 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 ANKRD10Q9NXR5 420 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 WARS2Q9UGM6 360 aaKnown RBP16.88■□□□□ 0.29
PTN-201ENST00000348225 FAM183AA6NL82 134 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 ZNF701M0R085 212 aaPredicted RBP16.88■□□□□ 0.29
PTN-201ENST00000348225 IMPA2O14732 288 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 FKBP2P26885 142 aaKnown RBP16.88■□□□□ 0.29
PTN-201ENST00000348225 ACVR2AP27037 513 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 PSMB9P28065 219 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 GTF2E2P29084 291 aaKnown RBP16.88■□□□□ 0.29
PTN-201ENST00000348225 RRADP55042 308 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 GP2P55259 537 aaKnown RBP16.88■□□□□ 0.29
PTN-201ENST00000348225 DSCR4P56555 118 aaPredicted RBP16.88■□□□□ 0.29
PTN-201ENST00000348225 RPL18Q07020 188 aaKnown RBP16.88■□□□□ 0.29
PTN-201ENST00000348225 ITGADQ13349 1161 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 TMED1Q13445 227 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 CRMP1Q14194 572 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 RTP5Q14D33 572 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 SGCBQ16585 318 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 ARMC4Q5T2S8 1044 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 C1QL3Q5VWW1 255 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 TIGD3Q6B0B8 471 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 MDGA2Q7Z553 956 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 FAM98AQ8NCA5 519 aaKnown RBP16.88■□□□□ 0.29
PTN-201ENST00000348225 OR52E2Q8NGJ4 325 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms