RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 NOX4Q9NPH5 578 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 ALPK2Q86TB3 2170 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 ZC3H12DA2A288 527 aaKnown RBP6.65□□□□□ -1.34
VCAN-202ENST00000342785 EFCAB7A8K855 629 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 POU3F4P49335 361 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 TMEM244Q5VVB8 128 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 VASH1Q7L8A9 365 aaPredicted RBP6.65□□□□□ -1.34
VCAN-202ENST00000342785 SIAH3Q8IW03 269 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 NLGN4YQ8NFZ3 816 aaPredicted RBP6.65□□□□□ -1.34
VCAN-202ENST00000342785 OR51Q1Q8NH59 317 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 SLC22A8Q8TCC7 542 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 RSC1A1Q92681 617 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 PMM1Q92871 262 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 CMC2Q9NRP2 79 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 PTTG3PQ9NZH4 202 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 DKKL1Q9UK85 242 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 CAMK2AQ9UQM7 478 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 PRELID1Q9Y255 219 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 TMEM269A0A1B0GVZ9 245 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 NPIPA2E9PIF3 369 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 NPIPA3F8WFD2 350 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 YY2O15391 372 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 TRAPPC2P0DI81 140 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 TRAPPC2BP0DI82 140 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 AMY2BP19961 511 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 CCNOP22674 350 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 CD34P28906 385 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 FABP5Q01469 135 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 CHRFAM7AQ494W8 412 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 MED25Q71SY5 747 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 BBS1Q8NFJ9 593 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 OR4C15Q8NGM1 316 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 PFN4Q8NHR9 129 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 ZNF304Q9HCX3 659 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 CUTCQ9NTM9 273 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 FTSJ1Q9UET6 329 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 KCNIP3Q9Y2W7 256 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 TRABD2BA6NFA1 517 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 FARS2O95363 451 aaKnown RBP6.65□□□□□ -1.35
VCAN-202ENST00000342785 HLA-DMAP28067 261 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 CSRP3P50461 194 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 RIPPLY1Q0D2K3 151 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 TDGQ13569 410 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 SYT9Q86SS6 491 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 OR5H6Q8NGV6 325 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 CRB3Q9BUF7 120 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 PLA2G12AQ9BZM1 189 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 SLC25A19Q9HC21 320 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 SLC39A1Q9NY26 324 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 LRIT1Q9P2V4 623 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 DHCR7Q9UBM7 475 aaKnown RBP6.65□□□□□ -1.35
VCAN-202ENST00000342785 KCNE3Q9Y6H6 103 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 CACNA1IQ9P0X4 2223 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 A6NL46 340 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 HCRTR1O43613 425 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 THBS1P07996 1170 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 SFTPDP35247 375 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 DDOSTP39656 456 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 KIAA1024LP59773 190 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 LTBQ06643 244 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 SPOCK1Q08629 439 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 SELENBP1Q13228 472 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 ZMYND11Q15326 602 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 BAK1Q16611 211 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 EEF1A1P5Q5VTE0 462 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 GARNL3Q5VVW2 1013 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 RAET1LQ5VY80 246 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 ELP2Q6IA86 826 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 SLC2A12Q8TD20 617 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 FAM71F1Q96KD3 344 aaPredicted RBP6.65□□□□□ -1.35
VCAN-202ENST00000342785 ZNF700Q9H0M5 742 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 SLAMF7Q9NQ25 335 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 POLE3Q9NRF9 147 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 NCDNQ9UBB6 729 aa6.65□□□□□ -1.35
VCAN-202ENST00000342785 OPN1LWP04000 364 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 PCMT1P22061 227 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 ETV6P41212 452 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 HSD11B2P80365 405 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 POU3F1Q03052 451 aaPredicted RBP6.64□□□□□ -1.35
VCAN-202ENST00000342785 ACY1Q03154 408 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 TMEM164Q5U3C3 297 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 ZNF547Q8IVP9 402 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 UEVLDQ8IX04 471 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 CPNE2Q96FN4 548 aaPredicted RBP6.64□□□□□ -1.35
VCAN-202ENST00000342785 TCTN2Q96GX1 697 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 LYRM4Q9HD34 91 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 SLC6A5Q9Y345 797 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 A6NIZ1 184 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 KDM4EB2RXH2 506 aaPredicted RBP6.64□□□□□ -1.35
VCAN-202ENST00000342785 TEX46H3BTG2 121 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 H7C2Y5 167 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 ATP1B1P05026 303 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 AKAIN1P0CW23 69 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 ELK1P19419 428 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 SOX18P35713 384 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 NUDT1P36639 197 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 EVX1P49640 407 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 RAP1BP61224 184 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 RAP1AP62834 184 aa6.64□□□□□ -1.35
VCAN-202ENST00000342785 GPR50Q13585 617 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms