RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 UQCRC2P22695 453 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 DEFB103AP81534 67 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 KLRB1Q12918 225 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 SKP2Q13309 424 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 IKZF1Q13422 519 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 ECM1Q16610 540 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 NKPD1Q17RQ9 610 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 DEFB133Q30KQ1 61 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 FSTL4Q6MZW2 842 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 SLC18B1Q6NT16 456 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PGBD2Q6P3X8 592 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 WDR73Q6P4I2 378 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TRAT1Q6PIZ9 186 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 SSX6Q7RTT6 188 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 ZC3H3Q8IXZ2 948 aaKnown RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 CBR4Q8N4T8 237 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 GPR148Q8TDV2 347 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 GNRHR2Q96P88 292 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 BEX2Q9BXY8 128 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PCDHAC1Q9H158 963 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 SLC25A32Q9H2D1 315 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PLEKHA2Q9HB19 425 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 WASH6PQ9NQA3 447 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 C1GALT1Q9NS00 363 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 SH2B3Q9UQQ2 575 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PCNX1Q96RV3 2341 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 VSTM2BA6NLU5 285 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 POM121CA8CG34 1229 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 C2CD4DB7Z1M9 353 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TRAF3IP2O43734 574 aaPredicted RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 SMPD2O60906 423 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF254O75437 659 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 KNG1P01042 644 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 CT45A10P0DMU9 189 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 MC4RP32245 332 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 MAN2A2P49641 1150 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 GALEQ14376 348 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 GK2Q14410 553 aaPredicted RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 IQCJQ1A5X6 159 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 SOHLH1Q5JUK2 328 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 ADAM5Q6NVV9 412 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 POMZP3Q6PJE2 187 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 MAMDC2Q7Z304 686 aaPredicted RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 ADIPOR2Q86V24 386 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 OR51A2Q8NGJ7 313 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 RND1Q92730 232 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 FAM46BQ96A09 425 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 MICU1Q9BPX6 476 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 COL25A1Q9BXS0 654 aaPredicted RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 GSX2Q9BZM3 304 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 EGLN3Q9H6Z9 239 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 GORASP2Q9H8Y8 452 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 SLC17A5Q9NRA2 495 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 SLC23A2Q9UGH3 650 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 FOXJ3Q9UPW0 622 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 BTRCQ9Y297 605 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PCNX2A6NKB5 2137 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TET1Q8NFU7 2136 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 CACNA1AO00555 2505 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 LOC285095A0A1B0GVY8 99 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 SCRG1O75711 98 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 OR5H8P0DN80 308 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PBX2P40425 430 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 WNT4P56705 351 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 LILRA4P59901 499 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 KCNJ11Q14654 390 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 ACSBG2Q5FVE4 666 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PRAMEF20Q5VT98 475 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM225Q6GV28 225 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 ADGRG3Q86Y34 549 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 KMT5CQ86Y97 462 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 NPAS3Q8IXF0 933 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 OR5W2Q8NH69 310 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PRAP1Q96NZ9 151 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 GHITMQ9H3K2 345 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 INTS6Q9UL03 887 aaKnown RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 EXO1Q9UQ84 846 aaKnown RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 EXOGQ9Y2C4 368 aaKnown RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 SLC22A23A1A5C7 686 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 M0QZ24 198 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 CDX4O14627 284 aaPredicted RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 EIF1BO60739 113 aaKnown RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 RPP14O95059 124 aaKnown RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PTBP3O95758 552 aaKnown RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 FCGR2AP12318 317 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 IL9P15248 144 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF8P17098 575 aaPredicted RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 POU3F4P49335 361 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF343Q6P1L6 599 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM220Q6QAJ8 160 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 NLRC3Q7RTR2 1065 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PRSS35Q8N3Z0 413 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PGBD5Q8N414 524 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PNPLA1Q8N8W4 532 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 OR5AP2Q8NGF4 316 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 OR11L1Q8NGX0 322 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 RPL3LQ92901 407 aaKnown RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 CCDC74AQ96AQ1 378 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 RPL10LQ96L21 214 aaKnown RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 CCDC74BQ96LY2 380 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms