RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 C22orf42Q6IC83 251 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 ZNF322Q6U7Q0 402 aaPredicted RBP10.11□□□□□ -0.79
LRP1-202ENST00000338962 COX15Q7KZN9 410 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 CADM3Q8N126 398 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 BMPERQ8N8U9 685 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 ZFP41Q8N8Y5 198 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 FAM98AQ8NCA5 519 aaKnown RBP10.11□□□□□ -0.79
LRP1-202ENST00000338962 PLPP5Q8NEB5 264 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 OR10H4Q8NGA5 316 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 OR5M3Q8NGP4 307 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 ZNF563Q8TA94 476 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 SPRYD4Q8WW59 207 aaPredicted RBP10.11□□□□□ -0.79
LRP1-202ENST00000338962 HPS1Q92902 700 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 KISS1RQ969F8 398 aaPredicted RBP10.11□□□□□ -0.79
LRP1-202ENST00000338962 LRFN5Q96NI6 719 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 TM9SF2Q99805 663 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 ZNF649Q9BS31 505 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 SNTG1Q9NSN8 517 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 CRNNQ9UBG3 495 aaPredicted RBP10.11□□□□□ -0.79
LRP1-202ENST00000338962 GSTK1Q9Y2Q3 226 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 YARS2Q9Y2Z4 477 aaKnown RBP10.11□□□□□ -0.79
LRP1-202ENST00000338962 CAB39Q9Y376 341 aaPredicted RBP10.11□□□□□ -0.79
LRP1-202ENST00000338962 ADAMTS20P59510 1910 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 DAPL1A0PJW8 107 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 B4E171 279 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 TO15178 435 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 LALBAP00709 142 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 CLUP10909 449 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 ABCD3P28288 659 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 TSPAN7P41732 249 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 SLC6A8P48029 635 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 MXD1Q05195 221 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 ACSM1Q08AH1 577 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 NKAIN1Q4KMZ8 207 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 CRTC2Q53ET0 693 aaPredicted RBP10.11□□□□□ -0.79
LRP1-202ENST00000338962 SPANXN2Q5MJ10 180 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 DESI1Q6ICB0 168 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 ATG4DQ86TL0 474 aaPredicted RBP10.11□□□□□ -0.79
LRP1-202ENST00000338962 SLC22A16Q86VW1 577 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 BPHLQ86WA6 291 aaPredicted RBP10.11□□□□□ -0.79
LRP1-202ENST00000338962 KLBQ86Z14 1044 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 SNX29P2Q8IUI4 249 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 C10orf53Q8N6V4 93 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 SLC38A9Q8NBW4 561 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 OR52E2Q8NGJ4 325 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 CEP19Q96LK0 163 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 TBX5Q99593 518 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 KCNS3Q9BQ31 491 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 ALG8Q9BVK2 526 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 TBL1XR1Q9BZK7 514 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 INPP5EQ9NRR6 644 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 SLC22A11Q9NSA0 550 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 CHRNA9Q9UGM1 479 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 RARRES3Q9UL19 164 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 WASF3Q9UPY6 502 aa10.11□□□□□ -0.79
LRP1-202ENST00000338962 CNOT1A5YKK6 2376 aaKnown RBP10.1□□□□□ -0.79
LRP1-202ENST00000338962 IGKV1D-42A0A075B6H8 117 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 A0A075B6Q4 140 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 MCIDASD6RGH6 385 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 RGS5O15539 181 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 OR7A10O76100 309 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 CDRT1O95170 752 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 PTTG1O95997 202 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 IL1AP01583 271 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 GYPBP06028 91 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 MRPL3P09001 348 aaKnown RBP10.1□□□□□ -0.79
LRP1-202ENST00000338962 PRPS1P60891 318 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 MC2RQ01718 297 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 DBPQ10586 325 aaPredicted RBP10.1□□□□□ -0.79
LRP1-202ENST00000338962 PWWP2BQ6NUJ5 590 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 DPY19L2P2Q6ZN68 376 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 SDR9C7Q8NEX9 313 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 OR4K13Q8NH42 304 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 SLC25A46Q96AG3 418 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 OMA1Q96E52 524 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 TMEM43Q9BTV4 400 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 TMED9Q9BVK6 235 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 MOV10Q9HCE1 1003 aaKnown RBP10.1□□□□□ -0.79
LRP1-202ENST00000338962 AKAP7Q9P0M2 348 aaPredicted RBP10.1□□□□□ -0.79
LRP1-202ENST00000338962 FBXL4Q9UKA2 621 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 SF3B6Q9Y3B4 125 aaKnown RBP10.1□□□□□ -0.79
LRP1-202ENST00000338962 ADAM18Q9Y3Q7 739 aa10.1□□□□□ -0.79
LRP1-202ENST00000338962 COL27A1Q8IZC6 1860 aaPredicted RBP10.1□□□□□ -0.79
LRP1-202ENST00000338962 IGLV3-12A0A075B6K2 115 aa10.09□□□□□ -0.79
LRP1-202ENST00000338962 CCDC187A0A096LP49 1063 aa10.09□□□□□ -0.79
LRP1-202ENST00000338962 A0A1W2PNU3 283 aaPredicted RBP10.09□□□□□ -0.79
LRP1-202ENST00000338962 CCDC182A6NF36 153 aa10.09□□□□□ -0.79
LRP1-202ENST00000338962 IDSB3KWA1 339 aa10.09□□□□□ -0.79
LRP1-202ENST00000338962 ALG1L2C9J202 215 aa10.09□□□□□ -0.79
LRP1-202ENST00000338962 GMFGO60234 142 aa10.09□□□□□ -0.79
LRP1-202ENST00000338962 TSPAN2O60636 221 aa10.09□□□□□ -0.79
LRP1-202ENST00000338962 TIAF1O95411 115 aa10.09□□□□□ -0.79
LRP1-202ENST00000338962 NUDT14O95848 222 aa10.09□□□□□ -0.79
LRP1-202ENST00000338962 IGF2P01344 180 aa10.09□□□□□ -0.79
LRP1-202ENST00000338962 APOA1P02647 267 aa10.09□□□□□ -0.79
LRP1-202ENST00000338962 HLA-DPB1P04440 258 aa10.09□□□□□ -0.79
LRP1-202ENST00000338962 HEXBP07686 556 aa10.09□□□□□ -0.79
LRP1-202ENST00000338962 SBK2P0C263 348 aa10.09□□□□□ -0.79
LRP1-202ENST00000338962 HIST1H1CP16403 213 aaKnown RBP10.09□□□□□ -0.79
LRP1-202ENST00000338962 SLC2A5P22732 501 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms