RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 KCNJ16Q9NPI9 418 aa12.77□□□□□ -0.37
RTN4-202ENST00000337526 NUMBLQ9Y6R0 609 aa12.77□□□□□ -0.37
RTN4-202ENST00000337526 hCG_1807616A0A1W2PRN6 198 aa12.77□□□□□ -0.37
RTN4-202ENST00000337526 TCRBV5S2A0A599 114 aa12.77□□□□□ -0.37
RTN4-202ENST00000337526 KLK8O60259 260 aa12.77□□□□□ -0.37
RTN4-202ENST00000337526 FOSL2P15408 326 aa12.77□□□□□ -0.37
RTN4-202ENST00000337526 OPCMLQ14982 345 aa12.77□□□□□ -0.37
RTN4-202ENST00000337526 AFMIDQ63HM1 303 aa12.77□□□□□ -0.37
RTN4-202ENST00000337526 FBXO46Q6PJ61 603 aaPredicted RBP12.77□□□□□ -0.37
RTN4-202ENST00000337526 SGCZQ96LD1 299 aa12.77□□□□□ -0.37
RTN4-202ENST00000337526 OR14A2Q96R54 314 aa12.77□□□□□ -0.37
RTN4-202ENST00000337526 CHRDQ9H2X0 955 aa12.77□□□□□ -0.37
RTN4-202ENST00000337526 ANKRD19PQ9H560 264 aa12.77□□□□□ -0.37
RTN4-202ENST00000337526 NIPAL2Q9H841 368 aa12.77□□□□□ -0.37
RTN4-202ENST00000337526 TM7SF3Q9NS93 570 aa12.77□□□□□ -0.37
RTN4-202ENST00000337526 COPS3Q9UNS2 423 aa12.77□□□□□ -0.37
RTN4-202ENST00000337526 SMCO3A2RU48 225 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 GJE1A6NN92 205 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 H7C1C5 153 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 UBBP0CG47 229 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 UBCP0CG48 685 aaKnown RBP12.76□□□□□ -0.37
RTN4-202ENST00000337526 HOXB9P17482 250 aaPredicted RBP12.76□□□□□ -0.37
RTN4-202ENST00000337526 HTR3AP46098 478 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 LCN6P62502 163 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 Q499Y3 187 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 ADAMTSL4Q6UY14 1074 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 CMTM1Q8IZ96 169 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 SLC7A6Q92536 515 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 CDCA3Q99618 268 aaPredicted RBP12.76□□□□□ -0.37
RTN4-202ENST00000337526 NICN1Q9BSH3 213 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 PLCXD1Q9NUJ7 323 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 SRPK3Q9UPE1 567 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 NUP214P35658 2090 aaPredicted RBP12.76□□□□□ -0.37
RTN4-202ENST00000337526 SLC6A12P48065 614 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 MFSD12Q6NUT3 480 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 SIAH3Q8IW03 269 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 OR14K1Q8NGZ2 314 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 TCEAL3Q969E4 200 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 DNTTIP1Q9H147 329 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 BIN3Q9NQY0 253 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 PGAP2Q9UHJ9 254 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 FBXL2Q9UKC9 423 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 SLC6A14Q9UN76 642 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 MOKQ9UQ07 419 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 TMEM82A0PJX8 343 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 SERINC4A6NH21 518 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 NFYAP23511 347 aaPredicted RBP12.76□□□□□ -0.37
RTN4-202ENST00000337526 OTX2P32243 289 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 RAB38P57729 211 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 ZMAT1Q5H9K5 638 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 NDUFAF7Q7L592 441 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 ZNF695Q8IW36 515 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 STEAP2Q8NFT2 490 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 NOX4Q9NPH5 578 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 NPFFR2Q9Y5X5 522 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 PTPRZ1P23471 2315 aaPredicted RBP12.76□□□□□ -0.37
RTN4-202ENST00000337526 TSPAN11A1L157 253 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 ZNF593O00488 134 aaPredicted RBP12.76□□□□□ -0.37
RTN4-202ENST00000337526 TACR3P29371 465 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 GPLD1P80108 840 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 MAT1AQ00266 395 aaKnown RBP12.76□□□□□ -0.37
RTN4-202ENST00000337526 MC2RQ01718 297 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 IDO2Q6ZQW0 420 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 ZNF511Q8NB15 262 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 PAQR8Q8TEZ7 354 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 SFXN2Q96NB2 322 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 SULT4A1Q9BR01 284 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 FBXO8Q9NRD0 319 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 KCNIP1Q9NZI2 227 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 CAMK2AQ9UQM7 478 aa12.76□□□□□ -0.37
RTN4-202ENST00000337526 A0A087WUU8 490 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 TMEM129A0AVI4 362 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 TMEM212A6NML5 194 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 FTCDNL1E5RQL4 147 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 HOXB5P09067 269 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 ITGB8P26012 769 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 CSNK1A1P48729 337 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 LUMP51884 338 aaPredicted RBP12.75□□□□□ -0.37
RTN4-202ENST00000337526 HSF5Q4G112 596 aaPredicted RBP12.75□□□□□ -0.37
RTN4-202ENST00000337526 SULF2Q8IWU5 870 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 RIMKLAQ8IXN7 391 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 LYSMD1Q96S90 227 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 CHST8Q9H2A9 424 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 LMAN1LQ9HAT1 526 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 NUDT21O43809 227 aaKnown RBP12.75□□□□□ -0.37
RTN4-202ENST00000337526 SERPINE2P07093 398 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 DCAF7P61962 342 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 PSPHP78330 225 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 SRYQ05066 204 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 BTN1A1Q13410 526 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 SF3B4Q15427 424 aaKnown RBP eCLIP12.75□□□□□ -0.379e-8■■■□□ 17.1
RTN4-202ENST00000337526 MEX3BQ6ZN04 569 aaKnown RBP12.75□□□□□ -0.37
RTN4-202ENST00000337526 FAM26EQ8N5C1 309 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 DYNC2LI1Q8TCX1 351 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 COL18A1P39060 1754 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 FAM230AA0A1W2PPH8 454 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 H3BQ06 376 aaPredicted RBP12.75□□□□□ -0.37
RTN4-202ENST00000337526 DPM1O60762 260 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 VEGFCP49767 419 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 CST9Q5W186 159 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms