RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 RANGRFQ9HD47 186 aaPredicted RBP8.08□□□□□ -1.12
SNCA-201ENST00000336904 TRPV5Q9NQA5 729 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 ENAMQ9NRM1 1142 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 GPR27Q9NS67 375 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 LANCL2Q9NS86 450 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 PAIP2BQ9ULR5 123 aaKnown RBP8.08□□□□□ -1.12
SNCA-201ENST00000336904 GTF2A1LQ9UNN4 478 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 TMEM72A0PK05 275 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 MEIOCA2RUB1 952 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 SLC22A31A6NKX4 558 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 SOX1O00570 391 aaPredicted RBP8.08□□□□□ -1.12
SNCA-201ENST00000336904 EEF1E1O43324 174 aaKnown RBP8.08□□□□□ -1.12
SNCA-201ENST00000336904 NDUFB2O95178 105 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 MT-ND5P03915 603 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 SLC2A5P22732 501 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 EDNRAP25101 427 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 TACR3P29371 465 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 MAGEA8P43361 318 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 INPP1P49441 399 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 SCN1BQ07699 218 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 SNTA1Q13424 505 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 HES5Q5TA89 166 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 ARHGAP40Q5TG30 622 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 STPG1Q5TH74 334 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 VASH1Q7L8A9 365 aaPredicted RBP8.08□□□□□ -1.12
SNCA-201ENST00000336904 ZNF595Q8IYB9 648 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 SDR16C5Q8N3Y7 309 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 SLC38A9Q8NBW4 561 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 LSM14AQ8ND56 463 aaKnown RBP8.08□□□□□ -1.12
SNCA-201ENST00000336904 DNAAF1Q8NEP3 725 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 OR52N1Q8NH53 320 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 ENKURQ8TC29 256 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 GPR119Q8TDV5 335 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 CHAC2Q8WUX2 184 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 ATOH1Q92858 354 aaPredicted RBP8.08□□□□□ -1.12
SNCA-201ENST00000336904 TRIM2Q9C040 744 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 CHRNA9Q9UGM1 479 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 TRBV2A0A0J9YWF9 115 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 TLCD2A6NGC4 264 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 H0YIG0 161 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 SCDO00767 359 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 SRPX2O60687 465 aaPredicted RBP8.08□□□□□ -1.12
SNCA-201ENST00000336904 SYPP08247 313 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 CD3GP09693 182 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 UBL4AP11441 157 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 IL11P20809 199 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 CTXN1P60606 82 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 EGR4Q05215 589 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 SQSTM1Q13501 440 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 GPR50Q13585 617 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 GRM7Q14831 915 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 C14orf28Q4W4Y0 310 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 AGAP6Q5VW22 663 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 CD200R1LQ6Q8B3 271 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 SLC35D2Q76EJ3 337 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 RAB43Q86YS6 212 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 C9orf40Q8IXQ3 194 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 RNF113BQ8IZP6 322 aaKnown RBP8.08□□□□□ -1.12
SNCA-201ENST00000336904 MINDY2Q8NBR6 621 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 C19orf18Q8NEA5 215 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 OR6C4Q8NGE1 309 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 NR4A3Q92570 626 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 PPP1R14AQ96A00 147 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 PPP1R14BQ96C90 147 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 C8orf44Q96CB5 159 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 PGLYRP3Q96LB9 341 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 AGAP4Q96P64 663 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 CCDC32Q9BV29 185 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 SLC7A5P2Q9GIP4 190 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 AKIRIN1Q9H9L7 192 aaPredicted RBP8.08□□□□□ -1.12
SNCA-201ENST00000336904 NANSQ9NR45 359 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 MED17Q9NVC6 651 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 GMEB2Q9UKD1 530 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 UGT2A1Q9Y4X1 527 aa8.08□□□□□ -1.12
SNCA-201ENST00000336904 TRAV6A0A075B6T7 132 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 IGHV1OR21-1A0A087WYE8 117 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 NPIPB9F8W1W9 429 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 MASP2O00187 686 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 ZNF354AO60765 605 aaPredicted RBP8.07□□□□□ -1.12
SNCA-201ENST00000336904 PIAS2O75928 621 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 PDGFBP01127 241 aaPredicted RBP8.07□□□□□ -1.12
SNCA-201ENST00000336904 SPI1P17947 270 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 FGF9P31371 208 aaPredicted RBP8.07□□□□□ -1.12
SNCA-201ENST00000336904 HTR3AP46098 478 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 GDI2P50395 445 aaKnown RBP8.07□□□□□ -1.12
SNCA-201ENST00000336904 RAB15P59190 212 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 NANOS3P60323 173 aaKnown RBP8.07□□□□□ -1.12
SNCA-201ENST00000336904 ZNF117Q03924 483 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 RNLSQ5VYX0 342 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 PTCRAQ6ISU1 281 aaPredicted RBP8.07□□□□□ -1.12
SNCA-201ENST00000336904 SLC35F2Q8IXU6 374 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 GPR135Q8IZ08 494 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 NPEPL1Q8NDH3 523 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 OR10AC1Q8NH08 325 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 TRMT10AQ8TBZ6 339 aaKnown RBP8.07□□□□□ -1.12
SNCA-201ENST00000336904 TMCO6Q96DC7 493 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 CTRCQ99895 268 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 SYT4Q9H2B2 425 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 WDR76Q9H967 626 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 NEK6Q9HC98 313 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms