RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SDC3O75056 442 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 SERPINA3P01011 423 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 PNMTP11086 282 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 HPGDP15428 266 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 RAB3BP20337 219 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 NPR2P20594 1047 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 HLA-DMAP28067 261 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 RBMS1P29558 406 aaKnown RBP13.3□□□□□ -0.28
TPM3-206ENST00000330188 TALDO1P37837 337 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 OR1D4P47884 311 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 INPP1P49441 399 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 TDGQ13569 410 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 C14orf28Q4W4Y0 310 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 CBLN3Q6UW01 205 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 PRR23CQ6ZRP0 262 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 TTLL10Q6ZVT0 673 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 UTS2BQ765I0 119 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 SLITRK4Q8IW52 837 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 UBASH3BQ8TF42 649 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 SNX33Q8WV41 574 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.3□□□□□ -0.28
TPM3-206ENST00000330188 OIT3Q8WWZ8 545 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 THAP4Q8WY91 577 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 TSLPQ969D9 159 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 TP53INP1Q96A56 240 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 ZDHHC12Q96GR4 267 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 DMRTB1Q96MA1 342 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 YIPF2Q9BWQ6 316 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 PHF7Q9BWX1 381 aaPredicted RBP13.3□□□□□ -0.28
TPM3-206ENST00000330188 EXOSC3Q9NQT5 275 aaKnown RBP13.3□□□□□ -0.28
TPM3-206ENST00000330188 NCDNQ9UBB6 729 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 MMACHCQ9Y4U1 282 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 USP34Q70CQ2 3546 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 COL5A1P20908 1838 aaPredicted RBP13.3□□□□□ -0.28
TPM3-206ENST00000330188 TMEM150CB9EJG8 249 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 UTS2O95399 124 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 IGF2P01344 180 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 CD1AP06126 327 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 MST1P26927 711 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 RCVRNP35243 200 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 AQP2P41181 271 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 GRK6P43250 576 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 CCR4P51679 360 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 CLDN20P56880 219 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 RPS11P62280 158 aaKnown RBP eCLIP13.3□□□□□ -0.28
TPM3-206ENST00000330188 SIRPAP78324 504 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 SMAD4Q13485 552 aaKnown RBP13.3□□□□□ -0.28
TPM3-206ENST00000330188 ZNF74Q16587 644 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 TATDN3Q17R31 274 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 ZNF57Q68EA5 555 aaPredicted RBP13.3□□□□□ -0.28
TPM3-206ENST00000330188 LYPD4Q6UWN0 246 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 PAMR1Q6UXH9 720 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 TMEM151BQ8IW70 566 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 DTX3Q8N9I9 347 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 LRRC75AQ8NAA5 344 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 LIPHQ8WWY8 451 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 TRIM63Q969Q1 353 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 UPRTQ96BW1 309 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 ZNF524Q96C55 264 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 HSPA12BQ96MM6 686 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 SLC46A1Q96NT5 459 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 SNX18Q96RF0 628 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 ACOXLQ9NUZ1 547 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 GNG8Q9UK08 70 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 NPFFR2Q9Y5X5 522 aa13.3□□□□□ -0.28
TPM3-206ENST00000330188 TEX13CA0A0J9YWL9 993 aa13.29□□□□□ -0.28
TPM3-206ENST00000330188 C4orf47A7E2U8 309 aa13.29□□□□□ -0.28
TPM3-206ENST00000330188 LANCL1O43813 399 aa13.29□□□□□ -0.28
TPM3-206ENST00000330188 TFPIP10646 304 aa13.29□□□□□ -0.28
TPM3-206ENST00000330188 EDNRAP25101 427 aa13.29□□□□□ -0.28
TPM3-206ENST00000330188 HOXD12P35452 270 aa13.29□□□□□ -0.28
TPM3-206ENST00000330188 HNRNPKP61978 463 aaKnown RBP eCLIP13.29□□□□□ -0.28
TPM3-206ENST00000330188 EGR4Q05215 589 aa13.29□□□□□ -0.28
TPM3-206ENST00000330188 IL10RAQ13651 578 aa13.29□□□□□ -0.28
TPM3-206ENST00000330188 TMEM53Q6P2H8 277 aa13.29□□□□□ -0.28
TPM3-206ENST00000330188 RPL22L1Q6P5R6 122 aaKnown RBP13.29□□□□□ -0.28
TPM3-206ENST00000330188 FAM122BQ7Z309 247 aa13.29□□□□□ -0.28
TPM3-206ENST00000330188 OR6K6Q8NGW6 343 aa13.29□□□□□ -0.28
TPM3-206ENST00000330188 Q96M85 177 aa13.29□□□□□ -0.28
TPM3-206ENST00000330188 MOGAT1Q96PD6 335 aa13.29□□□□□ -0.28
TPM3-206ENST00000330188 KLHDC3Q9BQ90 382 aa13.29□□□□□ -0.28
TPM3-206ENST00000330188 WACQ9BTA9 647 aa13.29□□□□□ -0.28
TPM3-206ENST00000330188 OR8D2Q9GZM6 311 aa13.29□□□□□ -0.28
TPM3-206ENST00000330188 RANGRFQ9HD47 186 aaPredicted RBP13.29□□□□□ -0.28
TPM3-206ENST00000330188 UCKL1Q9NWZ5 548 aa13.29□□□□□ -0.28
TPM3-206ENST00000330188 HIF3AQ9Y2N7 669 aa13.29□□□□□ -0.28
TPM3-206ENST00000330188 RNF215Q9Y6U7 377 aa13.29□□□□□ -0.28
TPM3-206ENST00000330188 NUP210LQ5VU65 1888 aa13.29□□□□□ -0.28
TPM3-206ENST00000330188 IGKV3D-11A0A0A0MRZ8 115 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 TRBV2A0A0J9YWF9 115 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 A0A1B0GVC2 190 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 A0A1W2PPK0 400 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 FRG2CA6NGY1 282 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 A6NIN4 97 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 RHPN2P1A8MT19 583 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 BLOC1S5-TXNDC5H3BN57 136 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 ZNF264O43296 627 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 OR2B3O76000 313 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 GLCEO94923 617 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 IGKV3-11P04433 115 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms