RNA–Protein interactions for RNA: ENST00000294161.10

TTC9C-201, Transcript of tetratricopeptide repeat domain 9C, humanhuman

TSL 1 (best)

Gene TTC9C, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-201ENST00000294161 CCDC58Q4VC31 144 aa13.5□□□□□ -0.25
TTC9C-201ENST00000294161 ZMAT1Q5H9K5 638 aa13.5□□□□□ -0.25
TTC9C-201ENST00000294161 DMKNQ6E0U4 476 aaPredicted RBP13.5□□□□□ -0.25
TTC9C-201ENST00000294161 RPL22L1Q6P5R6 122 aaKnown RBP13.5□□□□□ -0.25
TTC9C-201ENST00000294161 CNIH2Q6PI25 160 aa13.5□□□□□ -0.25
TTC9C-201ENST00000294161 Q8N9G6 341 aaPredicted RBP13.5□□□□□ -0.25
TTC9C-201ENST00000294161 GATSQ8NAP1 163 aa13.5□□□□□ -0.25
TTC9C-201ENST00000294161 PHYHIPQ92561 330 aa13.5□□□□□ -0.25
TTC9C-201ENST00000294161 TSLPQ969D9 159 aa13.5□□□□□ -0.25
TTC9C-201ENST00000294161 ZMYND19Q96E35 227 aaPredicted RBP13.5□□□□□ -0.25
TTC9C-201ENST00000294161 GAL3ST4Q96RP7 486 aa13.5□□□□□ -0.25
TTC9C-201ENST00000294161 TTYH2Q9BSA4 534 aa13.5□□□□□ -0.25
TTC9C-201ENST00000294161 FSCN3Q9NQT6 498 aa13.5□□□□□ -0.25
TTC9C-201ENST00000294161 WDR70Q9NW82 654 aa13.5□□□□□ -0.25
TTC9C-201ENST00000294161 DHCR7Q9UBM7 475 aaKnown RBP13.5□□□□□ -0.25
TTC9C-201ENST00000294161 TNRC6BQ9UPQ9 1833 aaKnown RBP13.5□□□□□ -0.25
TTC9C-201ENST00000294161 SPAG17Q6Q759 2223 aa13.5□□□□□ -0.25
TTC9C-201ENST00000294161 CCDC163A0A0D9SF12 145 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 FAM25AB3EWG3 89 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 FAM25CB3EWG5 89 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 FAM25GB3EWG6 89 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 GPRIN2O60269 458 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 HPGDSO60760 199 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 GATBO75879 557 aaKnown RBP13.49□□□□□ -0.25
TTC9C-201ENST00000294161 GLCEO94923 617 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 GYPBP06028 91 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 CD14P08571 375 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 SLC2A2P11168 524 aaPredicted RBP13.49□□□□□ -0.25
TTC9C-201ENST00000294161 RPS5P46782 204 aaKnown RBP13.49□□□□□ -0.25
TTC9C-201ENST00000294161 INPP1P49441 399 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 TMED10P49755 219 aaKnown RBP13.49□□□□□ -0.25
TTC9C-201ENST00000294161 OR12D2P58182 307 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 CDONQ4KMG0 1287 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 AGAP6Q5VW22 663 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 PRR23CQ6ZRP0 262 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 LRRC17Q8N6Y2 441 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 NPEPL1Q8NDH3 523 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 C17orf47Q8NEP4 570 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 IL17RDQ8NFM7 739 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 AGAP4Q96P64 663 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 DEPDC7Q96QD5 511 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 DCLRE1CQ96SD1 692 aaKnown RBP13.49□□□□□ -0.25
TTC9C-201ENST00000294161 ADOQ96SZ5 270 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 SOSTQ9BQB4 213 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 NUDT9Q9BW91 350 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 SLC7A5P2Q9GIP4 190 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 RNF32Q9H0A6 362 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 ZNF768Q9H5H4 540 aaKnown RBP13.49□□□□□ -0.25
TTC9C-201ENST00000294161 ZMIZ1Q9ULJ6 1067 aa13.49□□□□□ -0.25
TTC9C-201ENST00000294161 SIRT4Q9Y6E7 314 aaPredicted RBP13.49□□□□□ -0.25
TTC9C-201ENST00000294161 IGKV1D-42A0A075B6H8 117 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 TRAV1-2A0A0B4J238 106 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 A0A1B0GVT2 93 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 SMIM30A4D0T7 59 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 HYAL3O43820 417 aaPredicted RBP13.48□□□□□ -0.25
TTC9C-201ENST00000294161 CDC40O60508 579 aaKnown RBP eCLIP13.48□□□□□ -0.25
TTC9C-201ENST00000294161 CSF3P09919 207 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 FOLR1P15328 257 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 PNLIPP16233 465 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 SPI1P17947 270 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 PGCP20142 388 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 PNLIPRP2P54317 469 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 CAV3P56539 151 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 ERVK-25P63136 954 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 DAB2P98082 770 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 PLCXD2Q0VAA5 305 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 MRPL28Q13084 256 aaKnown RBP13.48□□□□□ -0.25
TTC9C-201ENST00000294161 IL18Q14116 193 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 EBPQ15125 230 aaKnown RBP13.48□□□□□ -0.25
TTC9C-201ENST00000294161 ALG10Q5BKT4 473 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 IDNKQ5T6J7 187 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 PMS2CLQ68D20 193 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 GPR139Q6DWJ6 353 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 ZNF517Q6ZMY9 492 aaPredicted RBP13.48□□□□□ -0.25
TTC9C-201ENST00000294161 KCTD20Q7Z5Y7 419 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 NRARPQ7Z6K4 114 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 PXKQ7Z7A4 578 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 LRRC28Q86X40 367 aaPredicted RBP13.48□□□□□ -0.25
TTC9C-201ENST00000294161 PLPP5Q8NEB5 264 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 OR1N1Q8NGS0 311 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.48□□□□□ -0.25
TTC9C-201ENST00000294161 DUSP23Q9BVJ7 150 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 TBL1XR1Q9BZK7 514 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 NMNAT2Q9BZQ4 307 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 PPP1R3EQ9H7J1 279 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 MMP25Q9NPA2 562 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 FGF21Q9NSA1 209 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 FBXL4Q9UKA2 621 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 NPFFR2Q9Y5X5 522 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 A8MU76 341 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 E9PI62 339 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 BLOC1S5-TXNDC5H3BN57 136 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 NDUFB5O43674 189 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 TXNDC12O95881 172 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 TACSTD2P09758 323 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 PRKAR1AP10644 381 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 IMPDH2P12268 514 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 CXCR1P25024 350 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 CASP3P42574 277 aa13.48□□□□□ -0.25
TTC9C-201ENST00000294161 NR0B1P51843 470 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms