RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 IL5RAQ01344 420 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 LINC00303Q3SY05 128 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 RNFT1Q5M7Z0 435 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 TMEM236Q5W0B7 351 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 ZNF620Q6ZNG0 422 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 ASB18Q6ZVZ8 466 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 OAFQ86UD1 273 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 ENTHD1Q8IYW4 607 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 LRRC17Q8N6Y2 441 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 OR13C2Q8NGS9 318 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 UBE2FQ969M7 185 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 SFXN2Q96NB2 322 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 PLA2G12AQ9BZM1 189 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 FKRPQ9H9S5 495 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 ACKR4Q9NPB9 350 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 ZNF229Q9UJW7 825 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 SIGLEC7Q9Y286 467 aa17.04■□□□□ 0.32
PDLIM3-202ENST00000284770 TRIM64A6NGJ6 449 aa17.03■□□□□ 0.32
PDLIM3-202ENST00000284770 PTP4A3O75365 173 aa17.03■□□□□ 0.32
PDLIM3-202ENST00000284770 ASAH2BP0C7U1 165 aa17.03■□□□□ 0.32
PDLIM3-202ENST00000284770 GFRA1P56159 465 aa17.03■□□□□ 0.32
PDLIM3-202ENST00000284770 PMP22Q01453 160 aa17.03■□□□□ 0.32
PDLIM3-202ENST00000284770 CDK5R2Q13319 367 aa17.03■□□□□ 0.32
PDLIM3-202ENST00000284770 SLC10A1Q14973 349 aa17.03■□□□□ 0.32
PDLIM3-202ENST00000284770 MAD2L1BPQ15013 274 aaPredicted RBP17.03■□□□□ 0.32
PDLIM3-202ENST00000284770 TMEM176BQ3YBM2 270 aaPredicted RBP17.03■□□□□ 0.32
PDLIM3-202ENST00000284770 ZBED5Q49AG3 693 aa17.03■□□□□ 0.32
PDLIM3-202ENST00000284770 SLX4IPQ5VYV7 408 aa17.03■□□□□ 0.32
PDLIM3-202ENST00000284770 CLDN22Q8N7P3 220 aa17.03■□□□□ 0.32
PDLIM3-202ENST00000284770 EGLN3Q9H6Z9 239 aa17.03■□□□□ 0.32
PDLIM3-202ENST00000284770 ZDHHC11Q9H8X9 412 aa17.03■□□□□ 0.32
PDLIM3-202ENST00000284770 TUBD1Q9UJT1 453 aa17.03■□□□□ 0.32
PDLIM3-202ENST00000284770 NCKAP5O14513 1909 aa17.03■□□□□ 0.32
PDLIM3-202ENST00000284770 TRAV27A0A087WT01 109 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 HCN1O60741 890 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 OPN1LWP04000 364 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 FHL1Q13642 323 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 BLMHQ13867 455 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 C6orf141Q5SZD1 244 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 OR8D4Q8NGM9 314 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 OR51A7Q8NH64 312 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 MFSD8Q8NHS3 518 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 CNIH3Q8TBE1 160 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 FAM81AQ8TBF8 368 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 HDAC2Q92769 488 aaKnown RBP17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 OSTF1Q92882 214 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 RELTQ969Z4 430 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 DNAJA3Q96EY1 480 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 CRELD1Q96HD1 420 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 TNFRSF13CQ96RJ3 184 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 ARHGAP9Q9BRR9 750 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 MFRPQ9BY79 579 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 YTHDF1Q9BYJ9 559 aaKnown RBP17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 RNF6Q9Y252 685 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 HDGFL3Q9Y3E1 203 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 CDH10Q9Y6N8 788 aa17.02■□□□□ 0.32
PDLIM3-202ENST00000284770 FTCDNL1E5RQL4 147 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 RCBTB2O95199 551 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 FAM87AP0C7U9 286 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 SMIM18P0DKX4 95 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 ZNF24P17028 368 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 SHC1P29353 583 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 SFTPDP35247 375 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 IDUAP35475 653 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 FXYD6P3P58550 94 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 CDK5Q00535 292 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 MYBPHQ13203 477 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 KCTD21Q4G0X4 260 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 SLC6A19Q695T7 634 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 C12orf73Q69YU5 71 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 RPL13AP3Q6NVV1 102 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 RPUSD3Q6P087 351 aaKnown RBP17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 TMEM154Q6P9G4 183 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 MAMDC2Q7Z304 686 aaPredicted RBP17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 SLC25A36Q96CQ1 311 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 ADNPQ9H2P0 1102 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 OR52D1Q9H346 318 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 PRORYQ9H606 182 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 ZNF226Q9NYT6 803 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 AASSQ9UDR5 926 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 SCOCQ9UIL1 159 aa17.02■□□□□ 0.31
PDLIM3-202ENST00000284770 GJE1A6NN92 205 aa17.01■□□□□ 0.31
PDLIM3-202ENST00000284770 HIST1H2ABP04908 130 aa17.01■□□□□ 0.31
PDLIM3-202ENST00000284770 IMPDH2P12268 514 aa17.01■□□□□ 0.31
PDLIM3-202ENST00000284770 GABRB1P18505 474 aa17.01■□□□□ 0.31
PDLIM3-202ENST00000284770 GIPRP48546 466 aa17.01■□□□□ 0.31
PDLIM3-202ENST00000284770 RPS4XP62701 263 aaKnown RBP17.01■□□□□ 0.31
PDLIM3-202ENST00000284770 MFSD13AQ14CX5 517 aa17.01■□□□□ 0.31
PDLIM3-202ENST00000284770 ANKDD1AQ495B1 522 aa17.01■□□□□ 0.31
PDLIM3-202ENST00000284770 SMARCD3Q6STE5 483 aa17.01■□□□□ 0.31
PDLIM3-202ENST00000284770 HIST3H2AQ7L7L0 130 aa17.01■□□□□ 0.31
PDLIM3-202ENST00000284770 RHOXF1Q8NHV9 184 aa17.01■□□□□ 0.31
PDLIM3-202ENST00000284770 C9orf43Q8TAL5 461 aaPredicted RBP17.01■□□□□ 0.31
PDLIM3-202ENST00000284770 TEX47Q8TBZ9 253 aa17.01■□□□□ 0.31
PDLIM3-202ENST00000284770 FANK1Q8TC84 345 aa17.01■□□□□ 0.31
PDLIM3-202ENST00000284770 APH1BQ8WW43 257 aa17.01■□□□□ 0.31
PDLIM3-202ENST00000284770 HIST1H2ACQ93077 130 aa17.01■□□□□ 0.31
PDLIM3-202ENST00000284770 OR5B2Q96R09 309 aa17.01■□□□□ 0.31
PDLIM3-202ENST00000284770 SLC25A19Q9HC21 320 aa17.01■□□□□ 0.31
PDLIM3-202ENST00000284770 MCCC2Q9HCC0 563 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms