RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 C6orf132Q5T0Z8 1188 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 SYT6Q5T7P8 510 aaPredicted RBP8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 STEAP1BQ6NZ63 245 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 SLC7A6Q92536 515 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 PDLIM5Q96HC4 596 aaKnown RBP8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 HRASLS5Q96KN8 279 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 BOCQ9BWV1 1114 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 NXF5Q9H1B4 397 aaKnown RBP8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 C20orf85Q9H1P6 137 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 IL26Q9NPH9 171 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 CHRNA9Q9UGM1 479 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 NPFFR2Q9Y5X5 522 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 MRC1P22897 1456 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 H7C1Q1 480 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 PAPLNO95428 1278 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 ADRB1P08588 477 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 CD79AP11912 226 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 TIMP2P16035 220 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 CD68P34810 354 aaPredicted RBP8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 HHEXQ03014 270 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 AKR1C1Q04828 323 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 ARL16Q0P5N6 197 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 CST6Q15828 149 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 ADIRFQ15847 76 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 SPRED3Q2MJR0 410 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 LYSMD2Q8IV50 215 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 FRMD1Q8N878 549 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 NKAIN3Q8N8D7 197 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 OR4F15Q8NGB8 312 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 OR52N1Q8NH53 320 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 SGPP1Q9BX95 441 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 ZNF629Q9UEG4 869 aaPredicted RBP8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 SLC23A2Q9UGH3 650 aa8.13□□□□□ -1.11
SCUBE3-201ENST00000274938 MCRIP1C9JLW8 97 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 ATP1B1P05026 303 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 AADACP22760 399 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 OGFOD3Q6PK18 319 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 SIAH3Q8IW03 269 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 LGI3Q8N145 548 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 CBLCQ9ULV8 474 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 SRPK3Q9UPE1 567 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 GAB2Q9UQC2 676 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 PRICKLE3O43900 615 aaPredicted RBP8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 OR2F2O95006 317 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 PITX1P78337 314 aaPredicted RBP8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 DSC1Q08554 894 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 OR2F1Q13607 317 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 MBTPS1Q14703 1052 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 GLYR1Q49A26 553 aaPredicted RBP8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 TMEM201Q5SNT2 666 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 C14orf79Q96F83 325 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 SLC41A2Q96JW4 573 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 OR7D2Q96RA2 312 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 VSX1Q9NZR4 365 aaPredicted RBP8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 STRAPQ9Y3F4 350 aaKnown RBP8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 MICAL3Q7RTP6 2002 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 MAN2B1O00754 1011 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 ILKQ13418 452 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 PCK2Q16822 640 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 RNF212Q495C1 297 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 SLX4IPQ5VYV7 408 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 NPWQ8N729 165 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 ACOT4Q8N9L9 421 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 OR10Z1Q8NGY1 313 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 OR4A16Q8NH70 328 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 ZNF331Q9NQX6 463 aaPredicted RBP8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 TRAV27A0A087WT01 109 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 PPP5D1E7EU14 171 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 GABARAPH6UMI1 98 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 SLC16A6O15403 523 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 GALR3O60755 368 aaPredicted RBP8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 DDAH2O95865 285 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 ZNF888P0CJ79 500 aaPredicted RBP8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 HOXD11P31277 338 aaPredicted RBP8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 P2RX1P51575 399 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 RANP62826 216 aaKnown RBP8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 IAH1Q2TAA2 248 aaPredicted RBP8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 ZNF684Q5T5D7 378 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 H3F3CQ6NXT2 135 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 IL20RBQ6UXL0 311 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 TMEM184AQ6ZMB5 413 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 GPRIN1Q7Z2K8 1008 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 SLC22A24Q8N4F4 322 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 TMEM102Q8N9M5 508 aaPredicted RBP8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 ABHD4Q8TB40 342 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 ENKD1Q9H0I2 346 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 B3GALNT1O75752 331 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 TACR3P29371 465 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 PDZK1IP1Q13113 114 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 ABHD17BQ5VST6 288 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 FJX1Q86VR8 437 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 OR6M1Q8NGM8 313 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 AMDHD1Q96NU7 426 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 CLSTN3Q9BQT9 956 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 SLC17A9Q9BYT1 436 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 SMG9Q9H0W8 520 aaKnown RBP8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 GALNT9Q9HCQ5 603 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 MUTYHQ9UIF7 546 aa8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 MRPS28Q9Y2Q9 187 aaKnown RBP8.12□□□□□ -1.11
SCUBE3-201ENST00000274938 CPN1P15169 458 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms