RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 TEAD3Q99594 435 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 RTN4RQ9BZR6 473 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 C14orf119Q9NWQ9 140 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 CHRNA9Q9UGM1 479 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 POU2F3Q9UKI9 436 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 TBC1D24Q9ULP9 559 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 CMAHPQ9Y471 501 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 V9GYH0 126 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 WDFY4Q6ZS81 3184 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 BDP1A6H8Y1 2624 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 J3QRE1 110 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 ARPC3O15145 178 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 ZFAND5O76080 213 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 NUDT14O95848 222 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 CXCR1P25024 350 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 MST1P26927 711 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 TACR3P29371 465 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 RPL4P36578 427 aaKnown RBP13.95□□□□□ -0.18
SF3B4-201ENST00000271628 RPS4XP62701 263 aaKnown RBP13.95□□□□□ -0.18
SF3B4-201ENST00000271628 ZNF74Q16587 644 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 KLHL12Q53G59 568 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 LIPKQ5VXJ0 399 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 LCN10Q6JVE6 187 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 SHFQ7M4L6 423 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 LHFPL3Q86UP9 236 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 LRRC17Q8N6Y2 441 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 OR51G2Q8NGK0 314 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 OR5M3Q8NGP4 307 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 OR52N1Q8NH53 320 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 GATAD2BQ8WXI9 593 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 TRMT61AQ96FX7 289 aaKnown RBP13.95□□□□□ -0.18
SF3B4-201ENST00000271628 GPX7Q96SL4 187 aaPredicted RBP13.95□□□□□ -0.18
SF3B4-201ENST00000271628 NRIP3Q9NQ35 241 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 INPP5EQ9NRR6 644 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 TXNL4BQ9NX01 149 aaKnown RBP13.95□□□□□ -0.18
SF3B4-201ENST00000271628 HAO2Q9NYQ3 351 aa13.95□□□□□ -0.18
SF3B4-201ENST00000271628 SPIN1Q9Y657 262 aaPredicted RBP13.95□□□□□ -0.18
SF3B4-201ENST00000271628 CCNKO75909 580 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 AVPR2P30518 371 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 OR2B6P58173 313 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 ACSM1Q08AH1 577 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 POU4F2Q12837 409 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 TPBGQ13641 420 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 CRMP1Q14194 572 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 OR2G6Q5TZ20 316 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 TMEM53Q6P2H8 277 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 ACBD7Q8N6N7 88 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 UFD1Q92890 307 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 DEPDC7Q96QD5 511 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 CMKLR1Q99788 373 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 MED18Q9BUE0 208 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 NDEL1Q9GZM8 345 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 OR51V1Q9H2C8 321 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 MED20Q9H944 212 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 TMEM165Q9HC07 324 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 HIF3AQ9Y2N7 669 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 TRBV11-1A0A0K0K1C0 115 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 MCIDASD6RGH6 385 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 LRRN3E7EW58 273 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 GSTT2P0CG29 244 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 GSTT2BP0CG30 244 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 GP1BBP13224 206 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 CCKBRP32239 447 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 HTR3AP46098 478 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 SLC16A1P53985 500 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 RPS7P62081 194 aaKnown RBP13.94□□□□□ -0.18
SF3B4-201ENST00000271628 C17orf67Q0P5P2 114 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 UBQLNLQ8IYU4 475 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 C10orf53Q8N6V4 93 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 CELF2-AS1Q8N7Q2 184 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 OR52E2Q8NGJ4 325 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 HCAR1Q9BXC0 346 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 SRRQ9GZT4 340 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 MMP25Q9NPA2 562 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 IER3IP1Q9Y5U9 82 aa13.94□□□□□ -0.18
SF3B4-201ENST00000271628 B4E171 279 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 C9J4A7 227 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 WWP2O00308 870 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 SCO2O43819 266 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 AKAP8O43823 692 aaKnown RBP13.93□□□□□ -0.18
SF3B4-201ENST00000271628 SLC25A12O75746 678 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 CDRT1O95170 752 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 KRT8P05787 483 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 ASAH2BP0C7U1 165 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 CCL4P13236 92 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 ZNF28P17035 718 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 TSPAN7P41732 249 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 EGR4Q05215 589 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 SCN1BQ07699 218 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 GPR50Q13585 617 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 ZNF79Q15937 498 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 NDUFA5Q16718 116 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 FCRLBQ6BAA4 426 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 TCEAL6Q6IPX3 200 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 NRARPQ7Z6K4 114 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 LAX1Q8IWV1 398 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 SIRT6Q8N6T7 355 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 ZNF485Q8NCK3 441 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 DUSP19Q8WTR2 217 aa13.93□□□□□ -0.18
SF3B4-201ENST00000271628 TM9SF4Q92544 642 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms