RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 CLCA1A8K7I4 914 aa22.26■■□□□ 1.15
SSBP4-201ENST00000270061 NPIPA5E9PKD4 350 aa22.26■■□□□ 1.15
SSBP4-201ENST00000270061 NDUFB5O43674 189 aa22.26■■□□□ 1.15
SSBP4-201ENST00000270061 MAKP20794 623 aa22.26■■□□□ 1.15
SSBP4-201ENST00000270061 EVI2BP34910 448 aa22.26■■□□□ 1.15
SSBP4-201ENST00000270061 MEOX1P50221 254 aa22.26■■□□□ 1.15
SSBP4-201ENST00000270061 OPN5Q6U736 354 aa22.26■■□□□ 1.15
SSBP4-201ENST00000270061 CBLN3Q6UW01 205 aa22.26■■□□□ 1.15
SSBP4-201ENST00000270061 PRSS48Q7RTY5 328 aa22.26■■□□□ 1.15
SSBP4-201ENST00000270061 GPR141Q7Z602 305 aa22.26■■□□□ 1.15
SSBP4-201ENST00000270061 C3orf49Q96BT1 292 aa22.26■■□□□ 1.15
SSBP4-201ENST00000270061 GPR137Q96N19 417 aa22.26■■□□□ 1.15
SSBP4-201ENST00000270061 TBL1XR1Q9BZK7 514 aa22.26■■□□□ 1.15
SSBP4-201ENST00000270061 RTN4RQ9BZR6 473 aa22.26■■□□□ 1.15
SSBP4-201ENST00000270061 ERVK-18Q9QC07 812 aa22.26■■□□□ 1.15
SSBP4-201ENST00000270061 ICAM5Q9UMF0 924 aa22.26■■□□□ 1.15
SSBP4-201ENST00000270061 NPIPA1Q9UND3 350 aa22.26■■□□□ 1.15
SSBP4-201ENST00000270061 ZNF407Q9C0G0 2248 aa22.26■■□□□ 1.15
SSBP4-201ENST00000270061 HTR3EA5X5Y0 456 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 WIPF3A6NGB9 483 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 RGS10O43665 173 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 WISP2O76076 250 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 PCMT1P22061 227 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 PCYT1AP49585 367 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 PIGFQ07326 219 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 PMS2P3Q13401 168 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 OCLNQ16625 522 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 RPL13AP3Q6NVV1 102 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 IQCF1Q8N6M8 205 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 PRRG3Q9BZD7 231 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 SLC19A3Q9BZV2 496 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 C12orf10Q9HB07 376 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 TVP23BQ9NYZ1 205 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 HEATR5AQ86XA9 2040 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 A0A1B0GUH1 482 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 M0R129 80 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 IGF2P01344 180 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 PNMTP11086 282 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 GPR85P60893 370 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 MARCH3Q86UD3 253 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 MISPQ8IVT2 679 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 SIAH3Q8IW03 269 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 RNF138Q8WVD3 245 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 GGHQ92820 318 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 TSSK6Q9BXA6 273 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 CEPT1Q9Y6K0 416 aa22.25■■□□□ 1.15
SSBP4-201ENST00000270061 ZNF354AO60765 605 aaPredicted RBP22.24■■□□□ 1.15
SSBP4-201ENST00000270061 GP1BBP13224 206 aa22.24■■□□□ 1.15
SSBP4-201ENST00000270061 PER3P56645 1201 aa22.24■■□□□ 1.15
SSBP4-201ENST00000270061 ZNF117Q03924 483 aa22.24■■□□□ 1.15
SSBP4-201ENST00000270061 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.24■■□□□ 1.15
SSBP4-201ENST00000270061 RNFT1Q5M7Z0 435 aa22.24■■□□□ 1.15
SSBP4-201ENST00000270061 C1QL3Q5VWW1 255 aa22.24■■□□□ 1.15
SSBP4-201ENST00000270061 RTL4Q6ZR62 310 aa22.24■■□□□ 1.15
SSBP4-201ENST00000270061 NUP54Q7Z3B4 507 aa22.24■■□□□ 1.15
SSBP4-201ENST00000270061 SLC15A4Q8N697 577 aa22.24■■□□□ 1.15
SSBP4-201ENST00000270061 TCEANCQ8N8B7 351 aa22.24■■□□□ 1.15
SSBP4-201ENST00000270061 SLC22A8Q8TCC7 542 aa22.24■■□□□ 1.15
SSBP4-201ENST00000270061 HGDQ93099 445 aa22.24■■□□□ 1.15
SSBP4-201ENST00000270061 MYDGFQ969H8 173 aa22.24■■□□□ 1.15
SSBP4-201ENST00000270061 TMCO6Q96DC7 493 aa22.24■■□□□ 1.15
SSBP4-201ENST00000270061 SGCZQ96LD1 299 aa22.24■■□□□ 1.15
SSBP4-201ENST00000270061 IL4I1Q96RQ9 567 aa22.24■■□□□ 1.15
SSBP4-201ENST00000270061 TEX12Q9BXU0 123 aa22.24■■□□□ 1.15
SSBP4-201ENST00000270061 TBC1D23Q9NUY8 699 aa22.24■■□□□ 1.15
SSBP4-201ENST00000270061 CNOT2Q9NZN8 540 aaKnown RBP22.24■■□□□ 1.15
SSBP4-201ENST00000270061 RCBTB2O95199 551 aa22.23■■□□□ 1.15
SSBP4-201ENST00000270061 NEDD8Q15843 81 aa22.23■■□□□ 1.15
SSBP4-201ENST00000270061 MEDAGQ5VYS4 303 aa22.23■■□□□ 1.15
SSBP4-201ENST00000270061 ATG4DQ86TL0 474 aaPredicted RBP22.23■■□□□ 1.15
SSBP4-201ENST00000270061 FJX1Q86VR8 437 aa22.23■■□□□ 1.15
SSBP4-201ENST00000270061 SVOPQ8N4V2 548 aa22.23■■□□□ 1.15
SSBP4-201ENST00000270061 TMCO5AQ8N6Q1 288 aa22.23■■□□□ 1.15
SSBP4-201ENST00000270061 RHNO1Q9BSD3 238 aa22.23■■□□□ 1.15
SSBP4-201ENST00000270061 COPS4Q9BT78 406 aa22.23■■□□□ 1.15
SSBP4-201ENST00000270061 CCDC90BQ9GZT6 254 aa22.23■■□□□ 1.15
SSBP4-201ENST00000270061 EXPH5Q8NEV8 1989 aa22.23■■□□□ 1.15
SSBP4-201ENST00000270061 ADAM10O14672 748 aa22.22■■□□□ 1.15
SSBP4-201ENST00000270061 PTP4A3O75365 173 aa22.22■■□□□ 1.15
SSBP4-201ENST00000270061 RFC3P40938 356 aa22.22■■□□□ 1.15
SSBP4-201ENST00000270061 SLC1A3P43003 542 aa22.22■■□□□ 1.15
SSBP4-201ENST00000270061 EMX1Q04741 257 aaPredicted RBP22.22■■□□□ 1.15
SSBP4-201ENST00000270061 RAB39AQ14964 217 aa22.22■■□□□ 1.15
SSBP4-201ENST00000270061 GTF2IRD2BQ6EKJ0 949 aa22.22■■□□□ 1.15
SSBP4-201ENST00000270061 LYPD8Q6UX82 237 aa22.22■■□□□ 1.15
SSBP4-201ENST00000270061 AHSA2Q719I0 299 aa22.22■■□□□ 1.15
SSBP4-201ENST00000270061 GTF2IRD2Q86UP8 949 aa22.22■■□□□ 1.15
SSBP4-201ENST00000270061 SLC43A2Q8N370 569 aa22.22■■□□□ 1.15
SSBP4-201ENST00000270061 ZFP62Q8NB50 900 aaPredicted RBP22.22■■□□□ 1.15
SSBP4-201ENST00000270061 SLC38A2Q96QD8 506 aa22.22■■□□□ 1.15
SSBP4-201ENST00000270061 ADAM19Q9H013 955 aa22.22■■□□□ 1.15
SSBP4-201ENST00000270061 OR52D1Q9H346 318 aa22.22■■□□□ 1.15
SSBP4-201ENST00000270061 TRGV8A0A0C4DH27 118 aa22.22■■□□□ 1.15
SSBP4-201ENST00000270061 EFCAB9A8MZ26 197 aa22.22■■□□□ 1.15
SSBP4-201ENST00000270061 H3BSA7 217 aa22.22■■□□□ 1.15
SSBP4-201ENST00000270061 KPNA4O00629 521 aaPredicted RBP22.22■■□□□ 1.15
SSBP4-201ENST00000270061 TFECO14948 347 aaPredicted RBP22.22■■□□□ 1.15
SSBP4-201ENST00000270061 HCRTR2O43614 444 aa22.22■■□□□ 1.15
SSBP4-201ENST00000270061 PRKYO43930 277 aa22.22■■□□□ 1.15
SSBP4-201ENST00000270061 ENTPD6O75354 484 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms