RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 MEIS3P1A6NDR6 274 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 PIP5K1CO60331 668 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 RAB3AP20336 220 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 DLSTP36957 453 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 CXCL12P48061 93 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 WNT3P56703 355 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 CLDN12P56749 244 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 DGCR2P98153 550 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 DLX2Q07687 328 aaPredicted RBP10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 FGL2Q14314 439 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 FBXO42Q6P3S6 717 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 LYPD8Q6UX82 237 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 PRICKLE2Q7Z3G6 844 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 BPHLQ86WA6 291 aaPredicted RBP10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 CCDC71Q8IV32 467 aaPredicted RBP10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 SVBPQ8N300 66 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 OR2L5Q8NG80 312 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 OR52E1Q8NGJ3 308 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 LMX1AQ8TE12 382 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 SCARB1Q8WTV0 552 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 MS4A4EQ96PG1 132 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 MARVELD1Q9BSK0 173 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 TRAV27A0A087WT01 109 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 SIX6O95475 246 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 ATP1B1P05026 303 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 UBBP0CG47 229 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 UBCP0CG48 685 aaKnown RBP10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 AKAIN1P0CW23 69 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 NPR2P20594 1047 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 S100A2P29034 98 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 AQP2P41181 271 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 METAP1P53582 386 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 ZNF542PQ5EBM4 170 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 C6orf132Q5T0Z8 1188 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 SLC38A6Q8IZM9 456 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 C12orf45Q8N5I9 185 aaPredicted RBP10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 IL22RA1Q8N6P7 574 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 ACOT4Q8N9L9 421 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 SMAP2Q8WU79 429 aaPredicted RBP10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 GAL3ST4Q96RP7 486 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 CMKLR1Q99788 373 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 CDCP1Q9H5V8 836 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 TAAR2Q9P1P5 351 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 ADAM29Q9UKF5 820 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 FAM171A2A8MVW0 826 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 MTRF1O75570 445 aaKnown RBP10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 CSTAP01040 98 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 GPR143P51810 404 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 RBMS2Q15434 407 aaKnown RBP10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 CLLU1Q5K131 121 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 TSSK4Q6SA08 328 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 SYT13Q7L8C5 426 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 ASPGQ86U10 573 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 TP53I13Q8NBR0 393 aaPredicted RBP10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 UPRTQ96BW1 309 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 C16orf58Q96GQ5 468 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 ATF6BQ99941 703 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 ZNF559Q9BR84 538 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 UBQLN3Q9H347 655 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 HRASLS2Q9NWW9 162 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 IER3IP1Q9Y5U9 82 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 NBASA2RRP1 2371 aa10.68□□□□□ -0.7
CLSTN3-201ENST00000266546 CDHR4A6H8M9 788 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 ACOD1A6NK06 481 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 PAPLNO95428 1278 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 IFNA21P01568 189 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 CXCR1P25024 350 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 FPR3P25089 353 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 CERS1P27544 350 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 LIM2P55344 173 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 C19orf57Q0VDD7 668 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 STK11Q15831 433 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 RAB11BQ15907 218 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 LAIR2Q6ISS4 152 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 CNTNAP3BQ96NU0 1288 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 LMF1Q96S06 567 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 BTBD2Q9BX70 525 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 SERTM1A2A2V5 107 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 FAM221BA6H8Z2 402 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 SOD1P00441 154 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 CCKBRP32239 447 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 ZFP36L2P47974 494 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 RPS27AP62979 156 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 UBA52P62987 128 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 BEX5Q5H9J7 111 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 UBALD2Q8IYN6 164 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 OR5T2Q8NGG2 359 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 PHOSPHO1Q8TCT1 267 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 DUSP19Q8WTR2 217 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 MSLNLQ96KJ4 702 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 HHIPQ96QV1 700 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 BCL2L14Q9BZR8 327 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 KIR3DX1Q9H7L2 352 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 SIDT1Q9NXL6 827 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 EXO1Q9UQ84 846 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 CCL27Q9Y4X3 112 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 GPR171O14626 319 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 GPRIN2O60269 458 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 ZNF35P13682 527 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms