RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 SMAD5Q99717 465 aaKnown RBP12.41□□□□□ -0.42
VMP1-201ENST00000262291 TMED9Q9BVK6 235 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 FGF20Q9NP95 211 aaPredicted RBP12.41□□□□□ -0.42
VMP1-201ENST00000262291 UBQLN4Q9NRR5 601 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 OCIAD1Q9NX40 245 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 NPAP1Q9NZP6 1156 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 TNFRSF10DQ9UBN6 386 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 IER3IP1Q9Y5U9 82 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 FAM171A2A8MVW0 826 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 DVL2O14641 736 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 HCN1O60741 890 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 TSC22D2O75157 780 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 IL33O95760 270 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 NUDT14O95848 222 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 PSKH1P11801 424 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 M6PRP20645 277 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 MST1P26927 711 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 ITPKBP27987 946 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 IL12BP29460 328 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 HTR1FP30939 366 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 UGT2B10P36537 528 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 RPL4P36578 427 aaKnown RBP12.41□□□□□ -0.42
VMP1-201ENST00000262291 LIMK1P53667 647 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 CAV3P56539 151 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 C19orf48Q6RUI8 117 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 KLBQ86Z14 1044 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 LNX2Q8N448 690 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 GALNT6Q8NCL4 622 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 RFKQ969G6 155 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 C8orf44Q96CB5 159 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 MVB12AQ96EY5 273 aa12.41□□□□□ -0.42
VMP1-201ENST00000262291 ZNF578Q96N58 590 aaPredicted RBP12.41□□□□□ -0.42
VMP1-201ENST00000262291 PELOQ9BRX2 385 aaKnown RBP12.41□□□□□ -0.42
VMP1-201ENST00000262291 CCDC86Q9H6F5 360 aaKnown RBP12.41□□□□□ -0.42
VMP1-201ENST00000262291 ZNF346Q9UL40 294 aaKnown RBP12.41□□□□□ -0.42
VMP1-201ENST00000262291 PRR23D1E9PI22 279 aaPredicted RBP12.4□□□□□ -0.42
VMP1-201ENST00000262291 HCRTR2O43614 444 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 SCRG1O75711 98 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 PRR23D2P0DMB1 279 aaPredicted RBP12.4□□□□□ -0.42
VMP1-201ENST00000262291 TDGF1P13385 188 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 NAGAP17050 411 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 CTRB1P17538 263 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 PSMA1P25786 263 aaKnown RBP12.4□□□□□ -0.42
VMP1-201ENST00000262291 CTBP2P56545 445 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 PLCXD2Q0VAA5 305 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 MLLT11Q13015 90 aaPredicted RBP12.4□□□□□ -0.42
VMP1-201ENST00000262291 KRR1Q13601 381 aaKnown RBP12.4□□□□□ -0.42
VMP1-201ENST00000262291 CTRB2Q6GPI1 263 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 FAM98AQ8NCA5 519 aaKnown RBP12.4□□□□□ -0.42
VMP1-201ENST00000262291 MOSPD2Q8NHP6 518 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 ZNF563Q8TA94 476 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 ZPLD1Q8TCW7 415 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 SGTBQ96EQ0 304 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 ZNF426Q9BUY5 554 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 C12orf10Q9HB07 376 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 MKKSQ9NPJ1 570 aaPredicted RBP12.4□□□□□ -0.42
VMP1-201ENST00000262291 TMEM5Q9Y2B1 443 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 ADAMTS20P59510 1910 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 IGKV1D-42A0A075B6H8 117 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 ELOA3DA6NLF2 546 aaPredicted RBP12.4□□□□□ -0.42
VMP1-201ENST00000262291 BLOC1S5-TXNDC5H3BN57 136 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 RGS5O15539 181 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 HIST1H1CP16403 213 aaKnown RBP12.4□□□□□ -0.42
VMP1-201ENST00000262291 PRKACAP17612 351 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 CELP19835 753 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 PSMD4P55036 377 aaKnown RBP12.4□□□□□ -0.42
VMP1-201ENST00000262291 ERVK-25P63136 954 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 SKP2Q13309 424 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 ELOA3BQ3SY89 546 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 CRTC2Q53ET0 693 aaPredicted RBP12.4□□□□□ -0.42
VMP1-201ENST00000262291 CCDC157Q569K6 752 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 PRPF38BQ5VTL8 546 aaKnown RBP12.4□□□□□ -0.42
VMP1-201ENST00000262291 TCEAL6Q6IPX3 200 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 LYPD4Q6UWN0 246 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 RFLNBQ8N5W9 214 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 CLDN22Q8N7P3 220 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 ELOA3Q8NG57 546 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 SLC7A6Q92536 515 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 PMM1Q92871 262 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 TCEAL3Q969E4 200 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 RASD2Q96D21 266 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 ZMYND19Q96E35 227 aaPredicted RBP12.4□□□□□ -0.42
VMP1-201ENST00000262291 CEP19Q96LK0 163 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 MOGAT1Q96PD6 335 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 HDHD5Q9BXW7 423 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 BARHL1Q9BZE3 327 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 WWTR1Q9GZV5 400 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 NDUFB11Q9NX14 153 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 STUB1Q9UNE7 303 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 FREM2Q5SZK8 3169 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 BDP1A6H8Y1 2624 aa12.4□□□□□ -0.42
VMP1-201ENST00000262291 A0A087WUJ7 227 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 FAM86C2PA6NEL3 165 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 RIIAD1A6NNX1 92 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 ZNF354AO60765 605 aaPredicted RBP12.39□□□□□ -0.43
VMP1-201ENST00000262291 SOX30O94993 753 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 CDRT1O95170 752 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 PAICSP22234 425 aaKnown RBP12.39□□□□□ -0.43
VMP1-201ENST00000262291 ZNF117Q03924 483 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 SNTA1Q13424 505 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms