RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 METTL11BQ5VVY1 283 aa17.38■□□□□ 0.37
COL4A3BP-201ENST00000261415 FEVQ99581 238 aa17.38■□□□□ 0.37
COL4A3BP-201ENST00000261415 DLL4Q9NR61 685 aa17.38■□□□□ 0.37
COL4A3BP-201ENST00000261415 LANCL2Q9NS86 450 aa17.38■□□□□ 0.37
COL4A3BP-201ENST00000261415 BABAM2Q9NXR7 383 aa17.38■□□□□ 0.37
COL4A3BP-201ENST00000261415 LOXL2Q9Y4K0 774 aa17.38■□□□□ 0.37
COL4A3BP-201ENST00000261415 OR2W5A6NFC9 320 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 B4E171 279 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 TGFBR3LH3BV60 316 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 ATP1B1P05026 303 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 TSPAN7P41732 249 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 HSD17B7P56937 341 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 RGNQ15493 299 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 TMEM64Q6YI46 380 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 CBLL1Q75N03 491 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 COX15Q7KZN9 410 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 RAB11FIP2Q7L804 512 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 SERPINA11Q86U17 422 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 NEURL3Q96EH8 262 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 POLR2J2Q9GZM3 115 aaKnown RBP17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 SLC22A11Q9NSA0 550 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 PPIEQ9UNP9 301 aaKnown RBP17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 CLDN16Q9Y5I7 305 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 A8MVJ9 347 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 MT-CO3P00414 261 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 APOC3P02656 99 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 NMBP08949 121 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 RORAP35398 523 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 MC3RP41968 323 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 CASP9P55211 416 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 GPR176Q14439 515 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 P2RY14Q15391 338 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 SWI5Q1ZZU3 235 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 COX20Q5RI15 118 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 RNLSQ5VYX0 342 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 ZNF385CQ66K41 422 aaPredicted RBP17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 FAM198BQ6UWH4 519 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 MED25Q71SY5 747 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 OR52N2Q8NGI0 321 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 ELP4Q96EB1 424 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 HSH2DQ96JZ2 352 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 BCL2L14Q9BZR8 327 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 DNTTIP1Q9H147 329 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 CHST8Q9H2A9 424 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 ZCCHC3Q9NUD5 404 aaKnown RBP17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 COMMD3Q9UBI1 195 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 CNOT1A5YKK6 2376 aaKnown RBP17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 CFAP54Q96N23 3096 aa17.37■□□□□ 0.37
COL4A3BP-201ENST00000261415 HPGDSO60760 199 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 MAOAP21397 527 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 KDELR2P33947 212 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 IGLV3-21P80748 117 aaPredicted RBP17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 STX4Q12846 297 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 NCF4Q15080 339 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 HES3Q5TGS1 186 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 SZRD1Q7Z422 152 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 PIAS4Q8N2W9 510 aaPredicted RBP17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 FTMTQ8N4E7 242 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 OR1M1Q8NGA1 313 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 SFXN5Q8TD22 340 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 KAT2AQ92830 837 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 OTULINQ96BN8 352 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 LIN37Q96GY3 246 aaPredicted RBP17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 ZNF251Q9BRH9 671 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 MKKSQ9NPJ1 570 aaPredicted RBP17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 NUBP2Q9Y5Y2 271 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 GTPBP1O00178 669 aaKnown RBP17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 LGALS8O00214 317 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 CBX7O95931 251 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 GLAP06280 429 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 SLC35E2P0CK97 266 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 PEPDP12955 493 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 ZNF28P17035 718 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 CXCL3P19876 107 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 CRATP43155 626 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 CRYZQ08257 329 aaKnown RBP17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 NKAIN1Q4KMZ8 207 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 VWA2Q5GFL6 755 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 MZT2AQ6P582 158 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 C6orf120Q7Z4R8 191 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 PROKR2Q8NFJ6 384 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 CXorf58Q96LI9 332 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 SFXN2Q96NB2 322 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 KATNB1Q9BVA0 655 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 MKL2Q9ULH7 1088 aa17.36■□□□□ 0.37
COL4A3BP-201ENST00000261415 ADAMDEC1O15204 470 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 ADRA2AP08913 450 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 SMIM6P0DI80 62 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 SULT1A3P0DMM9 295 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 SULT1A4P0DMN0 295 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 ETV5P41161 510 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 ATRAIDQ6UW56 229 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 VTCN1Q7Z7D3 282 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 MOAP1Q96BY2 351 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 ZNF451Q9Y4E5 1061 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 MMACHCQ9Y4U1 282 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 SDK2Q58EX2 2172 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 SPAARA0A1B0GVQ0 90 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 GPR171O14626 319 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 DKK1O94907 266 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms