RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ELAVL2Q12926 359 aaKnown RBP6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 EIF2B1Q14232 305 aaKnown RBP6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 RBMS2Q15434 407 aaKnown RBP6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 HIST3H3Q16695 136 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 CST9Q5W186 159 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 LDLRAD3Q86YD5 345 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 SIGLECL1Q8N7X8 197 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 ADAMTS17Q8TE56 1095 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 HASPINQ8TF76 798 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 TWIST2Q8WVJ9 160 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 ADGRG7Q96K78 797 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 RBP7Q96R05 134 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 ARHGDIGQ99819 225 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 CHRNA9Q9UGM1 479 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 LSM7Q9UK45 103 aaKnown RBP6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 NAV1Q8NEY1 1877 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 BLACEA4D250 179 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 ZNF670-ZNF695F2Z2N8 137 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 RFXANKO14593 260 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 DVL1O14640 695 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 CA12O43570 354 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 ALPPL2P10696 532 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 CD46P15529 392 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 ATAT1Q5SQI0 421 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 TMEM69Q5SWH9 247 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 RAET1LQ5VY80 246 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 RGS7BPQ6MZT1 257 aaPredicted RBP6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 CES5AQ6NT32 575 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 PIM3Q86V86 326 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 ASB5Q8WWX0 329 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 ACOX2Q99424 681 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 MAGIXQ9H6Y5 334 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 HMX1Q9NP08 348 aaPredicted RBP6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 DUS2Q9NX74 493 aaKnown RBP6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 CLEC2DQ9UHP7 191 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 ZDHHC8Q9ULC8 765 aa6.3□□□□□ -1.4
PDGFRA-201ENST00000257290 MEX3AA1L020 520 aaKnown RBP6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 XKRYO14609 159 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 HOXA9P31269 272 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 HERPUD1Q15011 391 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 MPPE1Q53F39 396 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 REEP3Q6NUK4 255 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 BOD1L2Q8IYS8 172 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 TMEM86AQ8N2M4 240 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 OR52J3Q8NH60 311 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 SORCS1Q8WY21 1168 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 CDKN2AIPNLQ96HQ2 116 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 C20orf85Q9H1P6 137 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 FKRPQ9H9S5 495 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 SIDT1Q9NXL6 827 aaKnown RBP6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 MYH3P11055 1940 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 hCG_1818297A0A087WSY0 165 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 DPYSL4O14531 572 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 OR1I1O60431 355 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 STBD1O95210 358 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 CT45A8P0DMV1 189 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 CT45A9P0DMV2 189 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 GLRA1P23415 457 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 F2RP25116 425 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 RPL3P39023 403 aaKnown RBP6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 TAS2R43P59537 309 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 PCLAFQ15004 111 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 CT45A2Q5DJT8 189 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 PPM1JQ5JR12 505 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 LDLRAD2Q5SZI1 272 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 DCAF12L1Q5VU92 463 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 MRNIPQ6NTE8 343 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 UNQ6126/PRO20091Q6UXV3 157 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 OR51D1Q8NGF3 324 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 TMEM163Q8TC26 289 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 ASB17Q8WXJ9 295 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 ZBTB45Q96K62 511 aaPredicted RBP6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 ALOXE3Q9BYJ1 711 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 SEMA4BQ9NPR2 832 aaPredicted RBP6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 DHCR7Q9UBM7 475 aaKnown RBP6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 C4AP0C0L4 1744 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 SMIM35A0A1B0GVV1 85 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 TISP43B9A030 160 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 DLX3O60479 287 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 GOT2P00505 430 aaKnown RBP6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 NMBP08949 121 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 CDK2P24941 298 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 LIPAP38571 399 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 GRM5P41594 1212 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 EMP1P54849 157 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 MFAP4P55083 255 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 F2RL1P55085 397 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 TMEM267Q0VDI3 215 aaPredicted RBP6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 GNMTQ14749 295 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 UBE2V2Q15819 145 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 SLC36A2Q495M3 483 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 SLC16A14Q7RTX9 510 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 MRPL52Q86TS9 123 aaKnown RBP6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 OR52N4Q8NGI2 321 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 OR5R1Q8NH85 324 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 OR14C36Q8NHC7 312 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 TMEM234Q8WY98 164 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 CTDSP1Q9GZU7 261 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 KCNH6Q9H252 994 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 MTHFD2LQ9H903 347 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms