RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 MAKP20794 623 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 CASRP41180 1078 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 GP2P55259 537 aaKnown RBP12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 CLDN20P56880 219 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 IQCJQ1A5X6 159 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 CNKSR3Q6P9H4 555 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 SH3RF2Q8TEC5 729 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 ZNF296Q8WUU4 475 aaPredicted RBP12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 CCDC74AQ96AQ1 378 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 GPR78Q96P69 363 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 CABLES2Q9BTV7 478 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 SUCNR1Q9BXA5 334 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 ALKBH4Q9NXW9 302 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 MYH3P11055 1940 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 CNTRLQ7Z7A1 2325 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 POM121BA6NF01 834 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 ZNF724A8MTY0 619 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 ALDOCP09972 364 aaKnown RBP12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 SNRPEP62304 92 aaKnown RBP12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 ILKQ13418 452 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 CLINT1Q14677 625 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 MSMO1Q15800 293 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 OR9K2Q8NGE7 335 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 ABHD4Q8TB40 342 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 GHSRQ92847 366 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 SORCS2Q96PQ0 1159 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 HIPK2Q9H2X6 1198 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 ARNT2Q9HBZ2 717 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 RNF186Q9NXI6 227 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 IL36AQ9UHA7 158 aa12.29□□□□□ -0.44
PCDHGA3-201ENST00000253812 MROH6A6NGR9 719 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 RAD1O60671 282 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 RGS11O94810 467 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 HPNP05981 417 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 SMIM6P0DI80 62 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 RPS18P62269 152 aaKnown RBP12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 RANBP10Q6VN20 620 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 C15orf39Q6ZRI6 1047 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 RELL2Q8NC24 303 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 SDR9C7Q8NEX9 313 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 GPR119Q8TDV5 335 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 SFT2D1Q8WV19 159 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 HERVK_113Q902F9 699 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 CLMPQ9H6B4 373 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 ISYNA1Q9NPH2 558 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 EXOSC3Q9NQT5 275 aaKnown RBP12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 PDLIM7Q9NR12 457 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 DUSP22Q9NRW4 184 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 OSGIN2Q9Y236 505 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 CHD4Q14839 1912 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 MYH11P35749 1972 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 FAM171A2A8MVW0 826 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 CSO75390 466 aaKnown RBP12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 H2AFB1P0C5Y9 115 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 HOXA11P31270 313 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 TSPAN31Q12999 210 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 LBHQ53QV2 105 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 Q6ZVL8 140 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 BAP18Q8IXM2 172 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 SIGLECL1Q8N7X8 197 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 OR10D4PQ8NGN7 298 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 C11orf84Q9BUA3 381 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 FAM72CH0Y354 149 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 ACTL6BO94805 426 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 NSA2O95478 260 aaKnown RBP12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 SPP1P10451 314 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 PIGAP37287 484 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 CTSOP43234 321 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 ENDOGQ14249 297 aaKnown RBP12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 FAM72AQ5TYM5 149 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 FCRLBQ6BAA4 426 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 FAM72DQ6L9T8 149 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 FAM72BQ86X60 149 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 WDTC1Q8N5D0 677 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 PAAF1Q9BRP4 392 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 SLC35A3Q9Y2D2 325 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 INSL6Q9Y581 213 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 CACNA1GO43497 2377 aa12.28□□□□□ -0.44
PCDHGA3-201ENST00000253812 FAM155AB1AL88 458 aaPredicted RBP12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 GABARAPH6UMI1 98 aa12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 RTCAO00442 366 aaKnown RBP12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 CD1EP15812 388 aa12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 PITX1P78337 314 aaPredicted RBP12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 MPEG1Q2M385 716 aa12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 ADGRG3Q86Y34 549 aa12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 CDS1Q92903 461 aa12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 LRFN5Q96NI6 719 aa12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 SPOCK3Q9BQ16 436 aa12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 ARV1Q9H2C2 271 aa12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 TM7SF3Q9NS93 570 aa12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 KIAA0100Q14667 2235 aaKnown RBP12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 NPIPA2E9PIF3 369 aa12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 C17orf112F2Z3M2 114 aa12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 NPIPA3F8WFD2 350 aa12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 TP53I11O14683 189 aa12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 TSPAN6O43657 245 aa12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 KCNK5O95279 499 aa12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 FUT1P19526 365 aa12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 STK19P49842 368 aaPredicted RBP12.27□□□□□ -0.44
PCDHGA3-201ENST00000253812 F2RL1P55085 397 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms