RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 MCIDASD6RGH6 385 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 IGHA1P01876 353 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 PRKAR1BP31321 381 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 EFNB1P98172 346 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 RUNX2Q13950 521 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 GRM7Q14831 915 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 NKPD1Q17RQ9 610 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 ELOA3BQ3SY89 546 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 TMEM35AQ53FP2 167 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 BTN2A1Q7KYR7 527 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 HDDC2Q7Z4H3 204 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 YAF2Q8IY57 180 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 ELOA3Q8NG57 546 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 DUSP19Q8WTR2 217 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 ZNRF4Q8WWF5 429 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 RERGQ96A58 199 aaPredicted RBP11.02□□□□□ -0.65
USHBP1-201ENST00000252597 C1QTNF7Q9BXJ2 289 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 SLITRK2Q9H156 845 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 EPHX3Q9H6B9 360 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 EXO5Q9H790 373 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 FGF22Q9HCT0 170 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 PRSS16Q9NQE7 514 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 KLHL9Q9P2J3 617 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 NUP50Q9UKX7 468 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 KHNYNO15037 678 aaKnown RBP11.02□□□□□ -0.65
USHBP1-201ENST00000252597 FGF17O60258 216 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 SRMP19623 302 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 NDUFS1P28331 727 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 SLC6A6P31641 620 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 STARP49675 285 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 NRG3P56975 720 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 EIPR1Q53HC9 387 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 SLC22A10Q63ZE4 541 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 LIX1LQ8IVB5 337 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 Q96M85 177 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 GPR137Q96N19 417 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 CMC2Q9NRP2 79 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 TBC1D29Q9UFV1 150 aa11.02□□□□□ -0.65
USHBP1-201ENST00000252597 EXOGQ9Y2C4 368 aaKnown RBP11.02□□□□□ -0.65
USHBP1-201ENST00000252597 POM121BA6NF01 834 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 SYT5O00445 386 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 HLA-DQB1P01920 261 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 NFYAP23511 347 aaPredicted RBP11.01□□□□□ -0.65
USHBP1-201ENST00000252597 CDK2P24941 298 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 RPL35P42766 123 aaKnown RBP11.01□□□□□ -0.65
USHBP1-201ENST00000252597 EMDP50402 254 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 GPR139Q6DWJ6 353 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 SLC35D2Q76EJ3 337 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 SLC25A36Q96CQ1 311 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 CRISPLD2Q9H0B8 497 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 TMEM185BQ9H7F4 350 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 MCCC2Q9HCC0 563 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 ISYNA1Q9NPH2 558 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 KCNE5Q9UJ90 142 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 ACSL5Q9ULC5 683 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 ANAPC1Q9H1A4 1944 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 ZNF879B4DU55 563 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 PYCARD-AS1I3L0S3 204 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 CCSO14618 274 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 PDCD5O14737 125 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 P2RX6O15547 441 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 EFEMP2O95967 443 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 ATP1B1P05026 303 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 CXCL2P19875 107 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 HSD17B2P37059 387 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 ZNF136P52737 540 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 PLA2G7Q13093 441 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 FZD5Q13467 585 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 ARHGAP19Q14CB8 494 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 SMAD2Q15796 467 aaKnown RBP11.01□□□□□ -0.65
USHBP1-201ENST00000252597 LILRA6Q6PI73 481 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 FAM220AQ7Z4H9 259 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 FAM219AQ8IW50 185 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 OR52R1Q8NGF1 315 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 OR51D1Q8NGF3 324 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 FBXW5Q969U6 566 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 SORCS2Q96PQ0 1159 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 ARPC5LQ9BPX5 153 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 ZNF649Q9BS31 505 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 GPN1Q9HCN4 374 aaPredicted RBP11.01□□□□□ -0.65
USHBP1-201ENST00000252597 SIGLEC7Q9Y286 467 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 PLEKHA6Q9Y2H5 1048 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 ALPK3Q96L96 1907 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 MEIKINA0A087WXM9 373 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 BHLHE40O14503 412 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 KCNAB3O43448 404 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 RP2O75695 350 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 SERPINA3P01011 423 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 TIMP1P01033 207 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 C1orf61Q13536 156 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 TAF13Q15543 124 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 CST6Q15828 149 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 RNLSQ5VYX0 342 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 TMEM81Q6P7N7 255 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 C7orf61Q8IZ16 206 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 ZNF619Q8N2I2 560 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 IL17RCQ8NAC3 791 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 CASTOR1Q8WTX7 329 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 PRSS27Q9BQR3 290 aa11.01□□□□□ -0.65
USHBP1-201ENST00000252597 HEXA-AS1Q9H8Q6 139 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms