RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 GJA1P17302 382 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ATP5A1P25705 553 aaKnown RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 PRSS3P35030 304 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 CD96P40200 585 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 FOXK1P85037 733 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 MC1RQ01726 317 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF155Q12901 538 aaPredicted RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ELAVL3Q14576 367 aaKnown RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 HNRNPA1L2Q32P51 320 aaKnown RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ZMAT1Q5H9K5 638 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 TMEM240Q5SV17 173 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ACSM5Q6NUN0 579 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 SLC30A6Q6NXT4 461 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 RAB11FIP2Q7L804 512 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 DGLUCYQ7Z3D6 616 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 CDH26Q8IXH8 852 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 OR4N4Q8N0Y3 316 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 BEST3Q8N1M1 668 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 LNX2Q8N448 690 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF740Q8NDX6 193 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 OR5K2Q8NHB8 316 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 HERVK_113Q902F9 699 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 UPRTQ96BW1 309 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF426Q9BUY5 554 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 SLC38A1Q9H2H9 487 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 UBQLN3Q9H347 655 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 EQTNQ9NQ60 294 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 TDP1Q9NUW8 608 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 GNG8Q9UK08 70 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 PCOLCE2Q9UKZ9 415 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 PRELID3BQ9Y3B1 194 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ARPC1BO15143 372 aaKnown RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 TMPRSS11DO60235 418 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 RNGTTO60942 597 aaKnown RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 IFNA4P05014 189 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 HMGN2P05204 90 aaKnown RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 HOXC4P09017 264 aaPredicted RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 FOSL1P15407 271 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 PVALBP20472 110 aaPredicted RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 HIST1H1TP22492 207 aaPredicted RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 EVI2BP34910 448 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 CLCNKAP51800 687 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 SEC13P55735 322 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 RAB2AP61019 212 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 SIRPAP78324 504 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 TEAD2Q15562 447 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 SYPL1Q16563 259 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 CYP27C1Q4G0S4 372 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 LY6G5CQ5SRR4 150 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 OLFML2AQ68BL7 652 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 KCTD18Q6PI47 426 aaPredicted RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ZFP41Q8N8Y5 198 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 KREMEN2Q8NCW0 462 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 PXT1Q8NFP0 134 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 NLGN4YQ8NFZ3 816 aaPredicted RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 OR4F15Q8NGB8 312 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 OR6T1Q8NGN1 323 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 OR2L8Q8NGY9 312 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 OR2T4Q8NH00 348 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 TSEN15Q8WW01 171 aaKnown RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ST8SIA4Q92187 359 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 HSPA12BQ96MM6 686 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 SFXN2Q96NB2 322 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 PRRT1Q99946 306 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 FBRSQ9HAH7 460 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 RXFP3Q9NSD7 469 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 SLC23A1Q9UHI7 598 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 C2orf92A0A1B0GVN3 265 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 RAB19A4D1S5 217 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 KDM4BO94953 1096 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 GBAP04062 536 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 RLN2P04090 185 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 CRYBA1P05813 215 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 RHOP08100 348 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ADRB1P08588 477 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 SBK2P0C263 348 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 PNMTP11086 282 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 MGMTP16455 207 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 NT5EP21589 574 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 KIR2DL1P43626 348 aaPredicted RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 GPR4P46093 362 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 PRDX1Q06830 199 aaKnown RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 PUDPQ08623 228 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 MAP4K2Q12851 820 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 DHCR24Q15392 516 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 SWI5Q1ZZU3 235 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ACTBL2Q562R1 376 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 AWAT2Q6E213 333 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 NDUFAF7Q7L592 441 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 TAF8Q7Z7C8 310 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 COMMD2Q86X83 199 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 OR5D16Q8NGK9 328 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 GPR148Q8TDV2 347 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ABHD5Q8WTS1 349 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ASB17Q8WXJ9 295 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 CCDC120Q96HB5 630 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ADAD1Q96M93 576 aaKnown RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 OR10A4Q9H209 315 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 PRDM7Q9NQW5 492 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 DLL4Q9NR61 685 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms