RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 OR2T7P0C7T2 308 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 BSGP35613 385 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 BLKP51451 505 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 SIRPAP78324 504 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 SLC35D2Q76EJ3 337 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF283Q8N7M2 679 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 OR13C3Q8NGS6 347 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 OR2T27Q8NH04 317 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 SYNPRQ8TBG9 265 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 TBC1D20Q96BZ9 403 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 NMNAT3Q96T66 252 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 MEMO1Q9Y316 297 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 SC5DO75845 299 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 FARS2O95363 451 aaKnown RBP4.27□□□□□ -1.73
VPS13C-201ENST00000249837 F13BP05160 661 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 NPR2P20594 1047 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 HOXC8P31273 242 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 TMEM52BQ4KMG9 183 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 ABCA11PQ4W5N1 156 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 ALG10Q5BKT4 473 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF836Q6ZNA1 936 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 Q6ZNB5 142 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 SPPL3Q8TCT6 385 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 FGF13Q92913 245 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 MIXL1Q9H2W2 232 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 CDCP1Q9H5V8 836 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 CLDND1Q9NY35 253 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 TAS2R8Q9NYW2 309 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 KCNE3Q9Y6H6 103 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF705EA8MWA4 302 aaPredicted RBP4.27□□□□□ -1.73
VPS13C-201ENST00000249837 ALX3O95076 343 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 LDOC1O95751 146 aaPredicted RBP4.27□□□□□ -1.73
VPS13C-201ENST00000249837 MPIG6BO95866 241 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 CCR2P41597 374 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 GPR50Q13585 617 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 TCTE1Q5JU00 501 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 UBE2NLQ5JXB2 153 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 C1orf94Q6P1W5 598 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 TPRA1Q86W33 373 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 OR4D11Q8NGI4 311 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 OR6N1Q8NGY5 312 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 OR6F1Q8NGZ6 308 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 OR52N1Q8NH53 320 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 MAN2C1Q9NTJ4 1040 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 B3GNT2Q9NY97 397 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF337Q9Y3M9 751 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 PAPPA2Q9BXP8 1791 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 GPR89AB7ZAQ6 455 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 SLC16A7O60669 478 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 GPR89BP0CG08 455 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 PIPP12273 146 aaPredicted RBP4.27□□□□□ -1.73
VPS13C-201ENST00000249837 UGT2B7P16662 529 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 SLC6A9P48067 706 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 CXADRP78310 365 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 ALKBH2Q6NS38 261 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 RFPL4BQ6ZWI9 263 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF584Q8IVC4 421 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 GLB1L2Q8IW92 636 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 PGAM5Q96HS1 289 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 SLC25A19Q9HC21 320 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 SDHAF3Q9NRP4 125 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 NAP1L6A6NFF2 107 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 MAN2B1O00754 1011 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 SEMA4FO95754 770 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 TRAPPC2P0DI81 140 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 TRAPPC2BP0DI82 140 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 LSSP48449 732 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 ARRB1P49407 418 aaPredicted RBP4.27□□□□□ -1.73
VPS13C-201ENST00000249837 LTBQ06643 244 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 KANSL1Q7Z3B3 1105 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 DCUN1D4Q92564 292 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 KIAA1143Q96AT1 154 aaPredicted RBP4.27□□□□□ -1.73
VPS13C-201ENST00000249837 MNTQ99583 582 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 TCF20Q9UGU0 1960 aaKnown RBP4.27□□□□□ -1.73
VPS13C-201ENST00000249837 GABRB1P18505 474 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 OR1D4P47884 311 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 RFX2P48378 723 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 HEPHL1Q6MZM0 1159 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 ZSCAN1Q8NBB4 408 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 STOML3Q8TAV4 291 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 ZFYVE21Q9BQ24 234 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 KLRF1Q9NZS2 232 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 FLVCR2Q9UPI3 526 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 RBM7Q9Y580 266 aaKnown RBP4.27□□□□□ -1.73
VPS13C-201ENST00000249837 TEX13DA0A0J9YY54 714 aaPredicted RBP4.27□□□□□ -1.73
VPS13C-201ENST00000249837 UBL3O95164 117 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 RIDAP52758 137 aaKnown RBP4.27□□□□□ -1.73
VPS13C-201ENST00000249837 GPR18Q14330 331 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 ADGRF3Q8IZF5 1079 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 TSTD1Q8NFU3 115 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 SEC22AQ96IW7 307 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 ZC3H10Q96K80 434 aaKnown RBP4.27□□□□□ -1.73
VPS13C-201ENST00000249837 WDR77Q9BQA1 342 aaPredicted RBP4.27□□□□□ -1.73
VPS13C-201ENST00000249837 CGGBP1Q9UFW8 167 aaPredicted RBP4.27□□□□□ -1.73
VPS13C-201ENST00000249837 SLC23A1Q9UHI7 598 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 EXO1Q9UQ84 846 aaKnown RBP4.27□□□□□ -1.73
VPS13C-201ENST00000249837 SLC6A5Q9Y345 797 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 H7C2Y5 167 aa4.27□□□□□ -1.73
VPS13C-201ENST00000249837 ANXA7P20073 488 aaKnown RBP4.27□□□□□ -1.73
VPS13C-201ENST00000249837 HOXD11P31277 338 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms