RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 C16orf52Q8NHV5 167 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 PRODH2Q9UF12 536 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 IGHV5-51A0A0C4DH38 117 aa20.33■□□□□ 0.85
CCDC9-201ENST00000221922 EEF1E1O43324 174 aaKnown RBP20.33■□□□□ 0.85
CCDC9-201ENST00000221922 AKR7A2O43488 359 aa20.33■□□□□ 0.85
CCDC9-201ENST00000221922 PPM1FP49593 454 aaPredicted RBP20.33■□□□□ 0.85
CCDC9-201ENST00000221922 PGDP52209 483 aa20.33■□□□□ 0.85
CCDC9-201ENST00000221922 SRSF5Q13243 272 aaKnown RBP20.33■□□□□ 0.85
CCDC9-201ENST00000221922 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.33■□□□□ 0.85
CCDC9-201ENST00000221922 SLC25A35Q3KQZ1 300 aa20.33■□□□□ 0.85
CCDC9-201ENST00000221922 SLC36A2Q495M3 483 aa20.33■□□□□ 0.85
CCDC9-201ENST00000221922 FAAH2Q6GMR7 532 aa20.33■□□□□ 0.85
CCDC9-201ENST00000221922 KIRREL2Q6UWL6 708 aa20.33■□□□□ 0.85
CCDC9-201ENST00000221922 ZNF440Q8IYI8 595 aa20.33■□□□□ 0.85
CCDC9-201ENST00000221922 BCORP1Q8N888 145 aa20.33■□□□□ 0.85
CCDC9-201ENST00000221922 ZDHHC12Q96GR4 267 aa20.33■□□□□ 0.85
CCDC9-201ENST00000221922 HYLS1Q96M11 299 aa20.33■□□□□ 0.85
CCDC9-201ENST00000221922 ST6GALNAC2Q9UJ37 374 aa20.33■□□□□ 0.85
CCDC9-201ENST00000221922 SERTAD3Q9UJW9 196 aa20.33■□□□□ 0.85
CCDC9-201ENST00000221922 FBXL4Q9UKA2 621 aa20.33■□□□□ 0.85
CCDC9-201ENST00000221922 TRAV1-2A0A0B4J238 106 aa20.33■□□□□ 0.84
CCDC9-201ENST00000221922 C7orf66A4D0T2 115 aa20.33■□□□□ 0.84
CCDC9-201ENST00000221922 SERINC4A6NH21 518 aa20.33■□□□□ 0.84
CCDC9-201ENST00000221922 H0YIG0 161 aa20.33■□□□□ 0.84
CCDC9-201ENST00000221922 SMLR1H3BR10 107 aa20.33■□□□□ 0.84
CCDC9-201ENST00000221922 NDUFB2O95178 105 aa20.33■□□□□ 0.84
CCDC9-201ENST00000221922 CSTAP01040 98 aa20.33■□□□□ 0.84
CCDC9-201ENST00000221922 ACVR1BP36896 505 aa20.33■□□□□ 0.84
CCDC9-201ENST00000221922 HTR2BP41595 481 aa20.33■□□□□ 0.84
CCDC9-201ENST00000221922 GPLD1P80108 840 aa20.33■□□□□ 0.84
CCDC9-201ENST00000221922 FHL1Q13642 323 aa20.33■□□□□ 0.84
CCDC9-201ENST00000221922 RPTNQ6XPR3 784 aa20.33■□□□□ 0.84
CCDC9-201ENST00000221922 DTX3Q8N9I9 347 aa20.33■□□□□ 0.84
CCDC9-201ENST00000221922 OR5J2Q8NH18 312 aa20.33■□□□□ 0.84
CCDC9-201ENST00000221922 GHSRQ92847 366 aa20.33■□□□□ 0.84
CCDC9-201ENST00000221922 SGTBQ96EQ0 304 aa20.33■□□□□ 0.84
CCDC9-201ENST00000221922 SCMH1Q96GD3 660 aa20.33■□□□□ 0.84
CCDC9-201ENST00000221922 PRUNE2Q8WUY3 3088 aa20.32■□□□□ 0.84
CCDC9-201ENST00000221922 A0A1B0GVC2 190 aa20.32■□□□□ 0.84
CCDC9-201ENST00000221922 A6NIN4 97 aa20.32■□□□□ 0.84
CCDC9-201ENST00000221922 PPM1BO75688 479 aa20.32■□□□□ 0.84
CCDC9-201ENST00000221922 IFNA16P05015 189 aa20.32■□□□□ 0.84
CCDC9-201ENST00000221922 MAOAP21397 527 aa20.32■□□□□ 0.84
CCDC9-201ENST00000221922 NTRK2Q16620 822 aa20.32■□□□□ 0.84
CCDC9-201ENST00000221922 ZNF767PQ75MW2 155 aa20.32■□□□□ 0.84
CCDC9-201ENST00000221922 CYB561A3Q8NBI2 242 aa20.32■□□□□ 0.84
CCDC9-201ENST00000221922 OR51Q1Q8NH59 317 aa20.32■□□□□ 0.84
CCDC9-201ENST00000221922 OIT3Q8WWZ8 545 aa20.32■□□□□ 0.84
CCDC9-201ENST00000221922 ZCCHC4Q9H5U6 513 aa20.32■□□□□ 0.84
CCDC9-201ENST00000221922 HYAL3O43820 417 aaPredicted RBP20.31■□□□□ 0.84
CCDC9-201ENST00000221922 PIAS2O75928 621 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 DHFRP00374 187 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 RAB3BP20337 219 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 PYCR1P32322 319 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 RGS19P49795 217 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 SSX6Q7RTT6 188 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 ZNF615Q8N8J6 731 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 SMAP2Q8WU79 429 aaPredicted RBP20.31■□□□□ 0.84
CCDC9-201ENST00000221922 SNAPC3Q92966 411 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 ERMAPQ96PL5 475 aaPredicted RBP20.31■□□□□ 0.84
CCDC9-201ENST00000221922 GHITMQ9H3K2 345 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 MRPL39Q9NYK5 338 aaKnown RBP20.31■□□□□ 0.84
CCDC9-201ENST00000221922 LRIT1Q9P2V4 623 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 ICAM5Q9UMF0 924 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 TP53BP1Q12888 1972 aaPredicted RBP20.31■□□□□ 0.84
CCDC9-201ENST00000221922 RHPN2P1A8MT19 583 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 OGG1O15527 345 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 SDC3O75056 442 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 C19orf57Q0VDD7 668 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 GRM7Q14831 915 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 SIX5Q8N196 739 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 HAVCR2Q8TDQ0 301 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 HSD17B8Q92506 261 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 CCNL2Q96S94 520 aaPredicted RBP20.31■□□□□ 0.84
CCDC9-201ENST00000221922 MFRPQ9BY79 579 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 UCKL1Q9NWZ5 548 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 CHRNA9Q9UGM1 479 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 HSPB11Q9Y547 144 aa20.31■□□□□ 0.84
CCDC9-201ENST00000221922 A0A087WUJ7 227 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 SERPINA3P01011 423 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 NNATQ16517 81 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 BCL2L15Q5TBC7 163 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 FAM205BPQ63HN1 556 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 CARFQ8N187 725 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 DNASE2BQ8WZ79 361 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 MED28Q9H204 178 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 KLHL1Q9NR64 748 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 UBL3O95164 117 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 GYPBP06028 91 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 MMP15P51511 669 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 SNRPD2P62316 118 aaKnown RBP20.3■□□□□ 0.84
CCDC9-201ENST00000221922 FCN2Q15485 313 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 CCDC58Q4VC31 144 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 C9orf62Q8N4C0 152 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 OR5H6Q8NGV6 325 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 YIPF5Q969M3 257 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 SPRTNQ9H040 489 aaPredicted RBP20.3■□□□□ 0.84
CCDC9-201ENST00000221922 DPAGT1Q9H3H5 408 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 ABRACLQ9P1F3 81 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 TMEM184BQ9Y519 407 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms