RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 H2-ObO35424 271 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Dsg2O55111 1122 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Alx3O70137 343 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 DxoO70348 397 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Msto1Q2YDW2 556 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Vmn1r11Q3SXA2 299 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Kdm4dQ3U2K5 510 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Slc22a13Q6A4L0 551 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Uhrf2Q7TMI3 803 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Pik3ip1Q7TMJ8 264 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Tas2r143Q7TQB9 293 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Mettl20Q80ZM3 255 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Poglut1Q8BYB9 392 aaKnown RBP9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 A730049H05RikQ8C940 139 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Cml2Q8CHQ9 238 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Plekho2Q8K124 495 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Gpr18Q8K1Z6 331 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Lin28aQ8K3Y3 209 aaKnown RBP9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Or51e2Q8VBV9 320 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Olfr935Q8VG16 308 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Olfr669Q8VGU9 317 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Asb12Q9D738 308 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Dapl1Q9D757 107 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Tmem176aQ9DCS1 244 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Olfr971Q9EQ96 307 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Stk25Q9Z2W1 426 aa9.04□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 TrdcA0A0G2JEU3 153 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Cd163l1A0A1B0GSB0 991 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Tomm5B1AXP6 51 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Zfp97E9PZP6 546 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Gm21833J3QPK1 500 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Zfp960L7N267 546 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Socs1O35716 212 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Hoxd11P23813 323 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 IapP24822 559 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 CpoxP36552 443 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 EpxP49290 716 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Tbx6P70327 436 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Htr1fQ02284 366 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Grhl3Q5FWH3 603 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Gm11492Q5ND19 536 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Klhl13Q80TF4 654 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 C1qtnf7Q8BVD7 289 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Trmt6Q8CE96 497 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Defb36Q8K3U4 67 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Olfr518Q8VEW1 333 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 LsrQ99KG5 594 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Mrm2Q9CPY0 246 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Dimt1Q9D0D4 313 aaKnown RBP9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Senp8Q9D2Z4 221 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Cts6Q9ET52 334 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Slc15a1Q9JIP7 709 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 PtgesQ9JM51 153 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Psma6Q9QUM9 246 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Tmem240B2RWJ3 173 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Gm9493F6SVV1 192 aaKnown RBP9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Gm11397F6V5V4 377 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 P01735 133 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Sbk2P0C5K1 362 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 VipP32648 170 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 TesP47226 423 aaKnown RBP9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Evx2P49749 475 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Pou3f4P62515 361 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 AhrrQ3U1U7 701 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Zfp791Q497V9 528 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 C130050O18RikQ497Y9 356 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Ift52Q62559 426 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Fbxo5Q7TSG3 421 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 DgkzQ80UP3 929 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 FRRS1Q8K385 592 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Olfr821Q8VG45 310 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Pycr1Q922W5 309 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Tinagl1Q99JR5 466 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Ttyh1Q9D3A9 450 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Trappc4Q9ES56 219 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Zfp873A0A1B0GT64 667 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 CK137956B1AYM9 596 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 CfpP11680 464 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Fpr1P33766 364 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 FahP35505 419 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Hoxd1Q01822 328 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 TfptQ3U1J1 259 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 B3gnt6Q3USF0 391 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Fut10Q5F2L2 481 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Surf4Q64310 269 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Olfr1349Q7TQV1 317 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Gpr152Q8BXS7 511 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Ccdc187Q8C5V8 958 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Nupl2Q8CIC2 420 aaKnown RBP9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Mgat2Q921V5 442 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Cd302Q9DCG2 228 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Nkx2-4Q9EQM3 354 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Herpud2Q9JJC9 404 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Thsd1Q9JM61 851 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Tmem176bQ9R1Q6 263 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 NcdnQ9Z0E0 729 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Kcnd3Q9Z0V1 655 aa9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Obsl1D3YYU8 1804 aaKnown RBP9.03□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Gm14418A2ARR6 358 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Gm14322A2AW66 358 aa9.02□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 64.8 ms