RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 H60cB1B213 197 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm1110F6Y113 635 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Ephb6O08644 1014 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Fezf1Q0VDQ9 475 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Esp1Q3LHH8 102 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Slc39a12Q5FWH7 689 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 SypQ62277 314 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr128Q7TRJ1 308 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Fbxo5Q7TSG3 421 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Igsf5Q7TSN7 370 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Mtnr1bQ8CIQ6 364 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Hspa12aQ8K0U4 675 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr644Q8VH21 314 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Pcdhb20Q91XZ9 799 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Slc35b3Q922Q5 369 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Mrps28Q9CY16 186 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Wdr53Q9DB94 358 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Slc15a1Q9JIP7 709 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Sec61a2Q9JLR1 476 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 OpcmlG5E8G3 345 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gfra2O08842 464 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Cdk2ap1O35207 114 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 P01673 111 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Camk2aP11798 478 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 StomP54116 284 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 BidP70444 195 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 TefmQ5SSK3 364 aaKnown RBP9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Slc5a6Q5U4D8 634 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr448Q8VES9 310 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr160Q8VGE3 309 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Itfg2Q91WI7 443 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Cep41Q99NF3 373 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Actl11Q9D5V1 1207 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Hapln1Q9QUP5 356 aaKnown RBP9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 SrrQ9QZX7 339 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Tmem176bQ9R1Q6 263 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Slc22a21Q9WTN6 564 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr31E9Q3K2 317 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Hsd17b12O70503 312 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Cox4i1P19783 169 aaKnown RBP9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Slc11a1P41251 548 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Defa11P50709 85 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Fam109bQ14B98 259 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Slc30a2Q2HJ10 371 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Epha1Q60750 977 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 HpQ61646 347 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Carns1Q6ZPS2 827 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 HhipQ7TN16 700 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Prss34Q80UR4 318 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 CslQ80X68 466 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Cdk3Q80YP0 303 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Trim23Q8BGX0 574 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Tmem62Q8BXJ9 643 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Ppp1r3bQ8C767 284 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Emc1Q8C7X2 997 aaKnown RBP9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 SuoxQ8R086 546 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Tspan10Q8VCF5 331 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Thap7Q8VCZ3 309 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Hdac8Q8VH37 377 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Slco1a6Q99J94 670 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Tmem37Q9JJV3 211 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Fam136b-psA0A140T8T1 138 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm16368A0A1Y7VNG9 144 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr1156A2AVC3 323 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Skint8A7XV07 398 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Zfp54E9PW05 585 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr613E9PYB4 317 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm21797J3QNW5 180 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Vmn1r169L7N275 304 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 HbaP01942 142 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Sult4a1P63046 284 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Nt5c3bQ3UFY7 300 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 CmahQ61419 577 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 PrlhrQ6VMN6 370 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 H2-M2Q6W9L1 343 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Fbxo22Q78JE5 402 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Trim46Q7TNM2 759 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Otop1Q80VM9 600 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm5662Q8BX20 144 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Kcnmb1Q8CAE3 191 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Esco2Q8CIB9 592 aaKnown RBP9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 BambiQ9D0L6 260 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Znrf4Q9DAH2 327 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Clec3aQ9EPW4 196 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Slc39a1Q9QZ03 324 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 D3Ertd254eA0A0G2JEM5 796 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm13539A0A1B0GSM6 183 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm11127A7VMS2 374 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Slc16a5G5E8K6 468 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Clk1P22518 483 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Rps25P62852 125 aaKnown RBP9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 MeikinQ5F2C3 434 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Zp3rQ60736 579 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Fzd6Q61089 709 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Rims3Q80U57 307 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Mettl20Q80ZM3 255 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 DhrsxQ8VBZ0 335 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Mtfr2Q8VED8 361 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr1504Q8VFQ4 315 aa9.28□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr1469Q8VFW5 309 aa9.28□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms