RNA–Protein interactions for RNA: YKL146W

AVT3, Transcript of Vacuolar transporter, yeastyeast

Gene AVT3, Length 2,079 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT3YKL146W SDS3P40505 327 aa5.54□□□□□ -1.52
AVT3YKL146W SCD6P45978 349 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52 RIP-Chip
AVT3YKL146W ORC5P50874 479 aa5.54□□□□□ -1.52
AVT3YKL146W DAK1P54838 584 aaKnown RBP5.54□□□□□ -1.52
AVT3YKL146W CSR1Q06705 408 aaKnown RBP5.54□□□□□ -1.52
AVT3YKL146W SUT2Q12286 268 aa5.54□□□□□ -1.52
AVT3YKL146W YOR131CQ12486 218 aa5.54□□□□□ -1.52
AVT3YKL146W SEC23P15303 768 aaKnown RBP5.54□□□□□ -1.52
AVT3YKL146W BCS1P32839 456 aa5.54□□□□□ -1.52
AVT3YKL146W VID24P38263 362 aa5.54□□□□□ -1.52
AVT3YKL146W SEC9P40357 651 aa5.54□□□□□ -1.52
AVT3YKL146W RPL34BP40525 121 aaKnown RBP5.54□□□□□ -1.52
AVT3YKL146W RNH70P53331 553 aa5.54□□□□□ -1.52
AVT3YKL146W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
AVT3YKL146W CEF1Q03654 590 aaPredicted RBP5.54□□□□□ -1.52
AVT3YKL146W TSR1Q07381 788 aaKnown RBP5.54□□□□□ -1.52
AVT3YKL146W RTP1Q12751 981 aa5.54□□□□□ -1.52
AVT3YKL146W TOM70P07213 617 aaKnown RBP5.53□□□□□ -1.52
AVT3YKL146W WHI2P12611 486 aa5.53□□□□□ -1.52
AVT3YKL146W TMT1P32643 299 aa5.53□□□□□ -1.52
AVT3YKL146W TOM20P35180 183 aa5.53□□□□□ -1.52
AVT3YKL146W STS1P38637 319 aa5.53□□□□□ -1.52
AVT3YKL146W HXT8P40886 569 aa5.53□□□□□ -1.52
AVT3YKL146W MMM1P41800 426 aa5.53□□□□□ -1.52
AVT3YKL146W ASN1P49089 572 aaKnown RBP5.53□□□□□ -1.52
AVT3YKL146W TAD1P53065 400 aa5.53□□□□□ -1.52
AVT3YKL146W ENV11P53246 860 aa5.53□□□□□ -1.52
AVT3YKL146W TBF1Q02457 562 aa5.53□□□□□ -1.52
AVT3YKL146W TRS130Q03660 1102 aa5.53□□□□□ -1.52
AVT3YKL146W ECM7Q06200 448 aa5.53□□□□□ -1.52
AVT3YKL146W YDL206WQ12424 762 aa5.53□□□□□ -1.52
AVT3YKL146W KIP1P28742 1111 aa5.52□□□□□ -1.53
AVT3YKL146W MSS51P32335 436 aa5.52□□□□□ -1.53
AVT3YKL146W SKG6P32900 734 aaPredicted RBP5.52□□□□□ -1.53
AVT3YKL146W MCX1P38323 520 aaPredicted RBP5.52□□□□□ -1.53
AVT3YKL146W KIC1P38692 1080 aa5.52□□□□□ -1.53
AVT3YKL146W CCC2P38995 1004 aa5.52□□□□□ -1.53
AVT3YKL146W YMR124WP39523 943 aaKnown RBP5.52□□□□□ -1.53
AVT3YKL146W SAD1P43589 448 aa5.52□□□□□ -1.53
AVT3YKL146W ESBP6P53918 673 aa5.52□□□□□ -1.53
AVT3YKL146W ULP1Q02724 621 aa5.52□□□□□ -1.53
AVT3YKL146W YML082WQ04533 649 aaKnown RBP5.52□□□□□ -1.53
AVT3YKL146W RGA2Q06407 1009 aa5.52□□□□□ -1.53
AVT3YKL146W SHS1Q07657 551 aa5.52□□□□□ -1.53
AVT3YKL146W RIF1P29539 1916 aa5.52□□□□□ -1.53
AVT3YKL146W RAD57P25301 460 aa5.52□□□□□ -1.53
AVT3YKL146W CBF2P32504 956 aa5.52□□□□□ -1.53
AVT3YKL146W SRB4P32569 687 aa5.52□□□□□ -1.53
AVT3YKL146W SWI3P32591 825 aa5.52□□□□□ -1.53
AVT3YKL146W RAD54P32863 898 aa5.52□□□□□ -1.53
AVT3YKL146W YGL015CP33199 130 aa5.52□□□□□ -1.53
AVT3YKL146W MMS4P38257 691 aa5.52□□□□□ -1.53
AVT3YKL146W FTR1P40088 404 aa5.52□□□□□ -1.53
AVT3YKL146W NDC80P40460 691 aa5.52□□□□□ -1.53
AVT3YKL146W MNP1P53163 194 aaPredicted RBP5.52□□□□□ -1.53
AVT3YKL146W RPA49Q01080 415 aaPredicted RBP5.52□□□□□ -1.53
AVT3YKL146W HOS3Q02959 697 aaKnown RBP5.52□□□□□ -1.53
AVT3YKL146W VPS60Q03390 229 aa5.52□□□□□ -1.53
AVT3YKL146W NAT1P12945 854 aaKnown RBP5.51□□□□□ -1.53
AVT3YKL146W PAH1P32567 862 aa5.51□□□□□ -1.53
AVT3YKL146W DUR3P33413 735 aa5.51□□□□□ -1.53
AVT3YKL146W EFM4P40516 257 aa5.51□□□□□ -1.53
AVT3YKL146W YMR1P47147 688 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
AVT3YKL146W CUS1Q02554 436 aaPredicted RBP5.51□□□□□ -1.53
AVT3YKL146W SOV1Q04748 898 aa5.51□□□□□ -1.53
AVT3YKL146W SML1Q04964 104 aa5.51□□□□□ -1.53
AVT3YKL146W VAC14Q06708 880 aa5.51□□□□□ -1.53
AVT3YKL146W IWR1Q07532 353 aaPredicted RBP5.51□□□□□ -1.53
AVT3YKL146W DAS2Q12084 232 aa5.51□□□□□ -1.53
AVT3YKL146W MDM20Q12387 796 aaKnown RBP5.51□□□□□ -1.53
AVT3YKL146W TRP2P00899 507 aaKnown RBP5.51□□□□□ -1.53
AVT3YKL146W IME1P21190 360 aa5.51□□□□□ -1.53
AVT3YKL146W SLX5P32828 619 aaKnown RBP5.51□□□□□ -1.53
AVT3YKL146W MRX3P38172 270 aa5.51□□□□□ -1.53
AVT3YKL146W UBP14P38237 781 aaKnown RBP5.51□□□□□ -1.53
AVT3YKL146W AFG3P39925 761 aa5.51□□□□□ -1.53
AVT3YKL146W RRD1P40454 393 aaKnown RBP5.51□□□□□ -1.53
AVT3YKL146W CPR7P47103 393 aa5.51□□□□□ -1.53
AVT3YKL146W CLA4P48562 842 aa5.51□□□□□ -1.53
AVT3YKL146W STE20Q03497 939 aaKnown RBP5.51□□□□□ -1.53
AVT3YKL146W MAG2Q06436 670 aaKnown RBP5.51□□□□□ -1.53
AVT3YKL146W YLR001CQ07895 862 aa5.51□□□□□ -1.53
AVT3YKL146W MCM16Q12262 181 aa5.51□□□□□ -1.53
AVT3YKL146W ZPS1Q12512 249 aa5.51□□□□□ -1.53
AVT3YKL146W SNF1P06782 633 aaKnown RBP5.5□□□□□ -1.53
AVT3YKL146W SPT2P06843 333 aaPredicted RBP5.5□□□□□ -1.53
AVT3YKL146W CDC33P07260 213 aaKnown RBP5.5□□□□□ -1.53
AVT3YKL146W CDC11P32458 415 aa5.5□□□□□ -1.53
AVT3YKL146W TCD1P38756 429 aa5.5□□□□□ -1.53
AVT3YKL146W SET5P38890 526 aaKnown RBP5.5□□□□□ -1.53
AVT3YKL146W NAB3P38996 802 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
AVT3YKL146W ALD5P40047 520 aaKnown RBP5.5□□□□□ -1.53
AVT3YKL146W AIM21P40563 679 aa5.5□□□□□ -1.53
AVT3YKL146W DAS1P47005 663 aa5.5□□□□□ -1.53
AVT3YKL146W VPS62P53285 467 aa5.5□□□□□ -1.53
AVT3YKL146W SGT2Q12118 346 aaKnown RBP5.5□□□□□ -1.53
AVT3YKL146W GIS3Q12418 502 aa5.5□□□□□ -1.53
AVT3YKL146W PET111P08468 800 aa5.49□□□□□ -1.53
AVT3YKL146W CKI1P20485 582 aa5.49□□□□□ -1.53
AVT3YKL146W DAL2P25335 343 aa5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms