RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeast

Gene SWD2, Length 990 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWD2	YKL018W	PPG1	P32838	368 aa		4.8	□□□□□ -1.64
SWD2	YKL018W	MOH1	P38191	138 aa		4.8	□□□□□ -1.64
SWD2	YKL018W	YHR020W	P38708	688 aa	Known RBP	4.8	□□□□□ -1.64
SWD2	YKL018W	NMD2	P38798	1089 aa	Known RBP	4.8	□□□□□ -1.64
SWD2	YKL018W	BUL1	P48524	976 aa		4.8	□□□□□ -1.64
SWD2	YKL018W	SLU7	Q02775	382 aa	Known RBP	4.8	□□□□□ -1.64
SWD2	YKL018W	CAN1	P04817	590 aa		4.79	□□□□□ -1.64
SWD2	YKL018W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
SWD2	YKL018W	SPC42	P36094	363 aa		4.79	□□□□□ -1.64
SWD2	YKL018W	SAK1	P38990	1142 aa		4.79	□□□□□ -1.64
SWD2	YKL018W	GYP8	P43570	497 aa		4.79	□□□□□ -1.64
SWD2	YKL018W	OSW7	P43611	510 aa		4.79	□□□□□ -1.64
SWD2	YKL018W	SSY5	P47002	699 aa		4.79	□□□□□ -1.64
SWD2	YKL018W	YGR283C	P53336	341 aa	Predicted RBP	4.79	□□□□□ -1.64
SWD2	YKL018W	DOS2	P54858	310 aa		4.79	□□□□□ -1.64
SWD2	YKL018W	BDF2	Q07442	638 aa		4.79	□□□□□ -1.64
SWD2	YKL018W	MCH5	Q08777	521 aa		4.79	□□□□□ -1.64
SWD2	YKL018W	ACF2	Q12168	779 aa		4.79	□□□□□ -1.64
SWD2	YKL018W	PPR1	P07272	904 aa	Predicted RBP	4.78	□□□□□ -1.64
SWD2	YKL018W	TUB3	P09734	445 aa	Known RBP	4.78	□□□□□ -1.64
SWD2	YKL018W	CAF20	P12962	161 aa	Known RBP	4.78	□□□□□ -1.64
SWD2	YKL018W	BET3	P36149	193 aa		4.78	□□□□□ -1.64
SWD2	YKL018W	ELO3	P40319	345 aa		4.78	□□□□□ -1.64
SWD2	YKL018W	FKH2	P41813	862 aa		4.78	□□□□□ -1.64
SWD2	YKL018W	ZDS1	P50111	915 aa	Known RBP	4.78	□□□□□ -1.64
SWD2	YKL018W	RNH70	P53331	553 aa		4.78	□□□□□ -1.64
SWD2	YKL018W	LRS4	Q04087	347 aa	Known RBP	4.78	□□□□□ -1.64
SWD2	YKL018W	NSE3	Q05541	303 aa		4.78	□□□□□ -1.64
SWD2	YKL018W	CRR1	Q05790	422 aa		4.78	□□□□□ -1.64
SWD2	YKL018W	OMS1	Q06668	471 aa		4.78	□□□□□ -1.64
SWD2	YKL018W	YCL002C	P25565	263 aa		4.77	□□□□□ -1.65
SWD2	YKL018W	SET5	P38890	526 aa	Known RBP	4.77	□□□□□ -1.65
SWD2	YKL018W	MET7	Q08645	548 aa		4.77	□□□□□ -1.65
SWD2	YKL018W	FRE5	Q08908	694 aa		4.77	□□□□□ -1.65
SWD2	YKL018W	DIF1	O13577	133 aa		4.76	□□□□□ -1.65
SWD2	YKL018W	STB4	P50104	949 aa		4.76	□□□□□ -1.65
SWD2	YKL018W	RTA1	P53047	317 aa		4.76	□□□□□ -1.65
SWD2	YKL018W	ASI2	P53895	289 aa		4.76	□□□□□ -1.65
SWD2	YKL018W	ERG5	P54781	538 aa		4.76	□□□□□ -1.65
SWD2	YKL018W	CHZ1	P40019	153 aa	Predicted RBP	4.75	□□□□□ -1.65
SWD2	YKL018W	STU2	P46675	888 aa		4.75	□□□□□ -1.65
SWD2	YKL018W	DAS1	P47005	663 aa		4.75	□□□□□ -1.65
SWD2	YKL018W	MTR3	P48240	250 aa	Predicted RBP	4.75	□□□□□ -1.65
SWD2	YKL018W	AMA1	P50082	593 aa		4.75	□□□□□ -1.65
SWD2	YKL018W	NRG1	Q03125	231 aa		4.75	□□□□□ -1.65
SWD2	YKL018W	MUS81	Q04149	632 aa	Predicted RBP	4.75	□□□□□ -1.65
SWD2	YKL018W	TRM13	Q12383	476 aa		4.75	□□□□□ -1.65
SWD2	YKL018W	PER1	P25625	357 aa		4.74	□□□□□ -1.65
SWD2	YKL018W	SPC29	P33419	253 aa		4.74	□□□□□ -1.65
SWD2	YKL018W	RLP7	P40693	322 aa	Known RBP	4.74	□□□□□ -1.65
SWD2	YKL018W	MUP1	P50276	574 aa		4.74	□□□□□ -1.65
SWD2	YKL018W	CIT2	P08679	460 aa		4.73	□□□□□ -1.65
SWD2	YKL018W	RRP14	P36080	434 aa	Known RBP	4.73	□□□□□ -1.65
SWD2	YKL018W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
SWD2	YKL018W	PFA3	P42836	336 aa		4.73	□□□□□ -1.65
SWD2	YKL018W	ALY2	P47029	1046 aa		4.73	□□□□□ -1.65
SWD2	YKL018W	HSV2	P50079	448 aa	Predicted RBP	4.73	□□□□□ -1.65
SWD2	YKL018W	ATP25	Q03153	612 aa		4.73	□□□□□ -1.65
SWD2	YKL018W	RPN4	Q03465	531 aa		4.73	□□□□□ -1.65
SWD2	YKL018W	HBT1	Q07653	1046 aa	Known RBP	4.73	□□□□□ -1.65
SWD2	YKL018W	YLR415C	O13578	112 aa		4.72	□□□□□ -1.65
SWD2	YKL018W	PRP4	P20053	465 aa	Known RBP	4.72	□□□□□ -1.65
SWD2	YKL018W	PPS1	P38148	807 aa		4.72	□□□□□ -1.65
SWD2	YKL018W	YBP2	P53169	641 aa		4.72	□□□□□ -1.65
SWD2	YKL018W	MRPS35	P53292	345 aa		4.72	□□□□□ -1.65
SWD2	YKL018W	ALG12	P53730	551 aa		4.72	□□□□□ -1.65
SWD2	YKL018W	MUK1	Q02866	612 aa		4.72	□□□□□ -1.65
SWD2	YKL018W	FPR3	P38911	411 aa	Known RBP	4.71	□□□□□ -1.66
SWD2	YKL018W	TMN2	Q04562	672 aa		4.71	□□□□□ -1.66
SWD2	YKL018W	ADY4	Q05955	493 aa		4.71	□□□□□ -1.66
SWD2	YKL018W	THI21	Q08975	551 aa		4.71	□□□□□ -1.66
SWD2	YKL018W	YBR182C-A	Q8TGU6	64 aa		4.71	□□□□□ -1.66
SWD2	YKL018W	HIS7	P33734	552 aa	Known RBP	4.7	□□□□□ -1.66
SWD2	YKL018W	YHL017W	P38745	532 aa		4.7	□□□□□ -1.66
SWD2	YKL018W	YIR042C	P40586	236 aa		4.7	□□□□□ -1.66
SWD2	YKL018W	ZIP2	P53061	704 aa		4.7	□□□□□ -1.66
SWD2	YKL018W	RPN10	P38886	268 aa	Known RBP	4.69	□□□□□ -1.66
SWD2	YKL018W	GDH3	P39708	457 aa		4.69	□□□□□ -1.66
SWD2	YKL018W	YFL052W	P43551	465 aa		4.69	□□□□□ -1.66
SWD2	YKL018W	YJL163C	P46996	555 aa		4.69	□□□□□ -1.66
SWD2	YKL018W	ERR1	P0CX10	437 aa		4.68	□□□□□ -1.66
SWD2	YKL018W	ERR2	P0CX11	437 aa		4.68	□□□□□ -1.66
SWD2	YKL018W	YBR259W	P38338	688 aa		4.68	□□□□□ -1.66
SWD2	YKL018W	BUD6	P41697	788 aa		4.68	□□□□□ -1.66
SWD2	YKL018W	GND2	P53319	492 aa		4.68	□□□□□ -1.66
SWD2	YKL018W	LAT1	P12695	482 aa	Known RBP	4.67	□□□□□ -1.66
SWD2	YKL018W	GSY1	P23337	708 aa		4.67	□□□□□ -1.66
SWD2	YKL018W	YBR053C	P38235	358 aa		4.67	□□□□□ -1.66
SWD2	YKL018W	RIA1	P53893	1110 aa		4.67	□□□□□ -1.66
SWD2	YKL018W	POB3	Q04636	552 aa	Known RBP	4.67	□□□□□ -1.66
SWD2	YKL018W	GAD1	Q04792	585 aa		4.67	□□□□□ -1.66
SWD2	YKL018W	IRC10	Q08118	586 aa		4.67	□□□□□ -1.66
SWD2	YKL018W	MET6	P05694	767 aa	Known RBP	4.66	□□□□□ -1.66
SWD2	YKL018W	TIM23	P32897	222 aa		4.66	□□□□□ -1.66
SWD2	YKL018W	MTH1	P35198	433 aa		4.66	□□□□□ -1.66
SWD2	YKL018W	SIC1	P38634	284 aa		4.66	□□□□□ -1.66
SWD2	YKL018W	PCL5	P38794	229 aa		4.66	□□□□□ -1.66
SWD2	YKL018W	DSS1	P39112	969 aa		4.66	□□□□□ -1.66
SWD2	YKL018W	NUP82	P40368	713 aa		4.66	□□□□□ -1.66
SWD2	YKL018W	ORC4	P54791	529 aa		4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 76.8 ms