RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 CCDC144AA2RUR9 1427 aa7.35□□□□□ -1.23
CASC19-260ENST00000641828 EIF3AQ14152 1382 aaKnown RBP7.35□□□□□ -1.23
CASC19-260ENST00000641828 PARD3Q8TEW0 1356 aa7.35□□□□□ -1.23
CASC19-260ENST00000641828 UGGT1Q9NYU2 1555 aa7.35□□□□□ -1.23
CASC19-260ENST00000641828 LRRIQ1Q96JM4 1722 aa7.35□□□□□ -1.23
CASC19-260ENST00000641828 TCF3P15923 654 aa7.35□□□□□ -1.23
CASC19-260ENST00000641828 SCTRP47872 440 aa7.35□□□□□ -1.23
CASC19-260ENST00000641828 ZSCAN30Q86W11 494 aa7.35□□□□□ -1.23
CASC19-260ENST00000641828 COL26A1Q96A83 441 aa7.35□□□□□ -1.23
CASC19-260ENST00000641828 NLRP1Q9C000 1473 aa7.35□□□□□ -1.23
CASC19-260ENST00000641828 MBD5Q9P267 1494 aa7.35□□□□□ -1.23
CASC19-260ENST00000641828 PTMSP20962 102 aa7.34□□□□□ -1.23
CASC19-260ENST00000641828 RIPK4P57078 832 aa7.34□□□□□ -1.23
CASC19-260ENST00000641828 TAGLNQ01995 201 aaKnown RBP7.34□□□□□ -1.23
CASC19-260ENST00000641828 CCDC173Q0VFZ6 552 aa7.34□□□□□ -1.23
CASC19-260ENST00000641828 GAS2L2Q8NHY3 880 aa7.34□□□□□ -1.23
CASC19-260ENST00000641828 AFF2P51816 1311 aa7.34□□□□□ -1.23
CASC19-260ENST00000641828 VAMP1P23763 118 aa7.34□□□□□ -1.24
CASC19-260ENST00000641828 RBM6P78332 1123 aaKnown RBP7.34□□□□□ -1.24
CASC19-260ENST00000641828 NAA30Q147X3 362 aaPredicted RBP7.34□□□□□ -1.24
CASC19-260ENST00000641828 SKOR2Q2VWA4 1001 aaPredicted RBP7.34□□□□□ -1.24
CASC19-260ENST00000641828 HELQQ8TDG4 1101 aa7.34□□□□□ -1.24
CASC19-260ENST00000641828 TBC1D32Q96NH3 1257 aa7.34□□□□□ -1.24
CASC19-260ENST00000641828 PPP1R9BQ96SB3 815 aa7.34□□□□□ -1.24
CASC19-260ENST00000641828 CDC42BPBQ9Y5S2 1711 aa7.33□□□□□ -1.24
CASC19-260ENST00000641828 KDM5DQ9BY66 1539 aa7.33□□□□□ -1.24
CASC19-260ENST00000641828 ZC3H13Q5T200 1668 aaKnown RBP7.33□□□□□ -1.24
CASC19-260ENST00000641828 TMEM229AB2RXF0 380 aa7.33□□□□□ -1.24
CASC19-260ENST00000641828 FOXO3O43524 673 aa7.33□□□□□ -1.24
CASC19-260ENST00000641828 IGFBP4P22692 258 aa7.33□□□□□ -1.24
CASC19-260ENST00000641828 MSNP26038 577 aaKnown RBP7.33□□□□□ -1.24
CASC19-260ENST00000641828 INTS6LQ5JSJ4 861 aaKnown RBP7.33□□□□□ -1.24
CASC19-260ENST00000641828 NKX2-3Q8TAU0 364 aa7.33□□□□□ -1.24
CASC19-260ENST00000641828 ANP32BQ92688 251 aaKnown RBP7.33□□□□□ -1.24
CASC19-260ENST00000641828 ERVH48-1M5A8F1 160 aa7.32□□□□□ -1.24
CASC19-260ENST00000641828 HS1BP3Q53T59 392 aa7.32□□□□□ -1.24
CASC19-260ENST00000641828 LCE2DQ5TA82 110 aaPredicted RBP7.32□□□□□ -1.24
CASC19-260ENST00000641828 FAM13BQ9NYF5 915 aa7.32□□□□□ -1.24
CASC19-260ENST00000641828 COL16A1Q07092 1604 aaPredicted RBP7.32□□□□□ -1.24
CASC19-260ENST00000641828 DYNC1I1O14576 645 aa7.32□□□□□ -1.24
CASC19-260ENST00000641828 TNNT2P45379 298 aaPredicted RBP7.32□□□□□ -1.24
CASC19-260ENST00000641828 ERVK-9P63128 1117 aa7.32□□□□□ -1.24
CASC19-260ENST00000641828 COL19A1Q14993 1142 aa7.32□□□□□ -1.24
CASC19-260ENST00000641828 DUSP27Q5VZP5 1158 aa7.32□□□□□ -1.24
CASC19-260ENST00000641828 VASH1Q7L8A9 365 aaPredicted RBP7.32□□□□□ -1.24
CASC19-260ENST00000641828 RGL4Q8IZJ4 473 aa7.32□□□□□ -1.24
CASC19-260ENST00000641828 QTRT2Q9H974 415 aaKnown RBP7.32□□□□□ -1.24
CASC19-260ENST00000641828 MAP4K5Q9Y4K4 846 aa7.32□□□□□ -1.24
CASC19-260ENST00000641828 ROCK1Q13464 1354 aa7.32□□□□□ -1.24
CASC19-260ENST00000641828 POTEMA6NI47 508 aa7.31□□□□□ -1.24
CASC19-260ENST00000641828 PTPN5P54829 565 aa7.31□□□□□ -1.24
CASC19-260ENST00000641828 DMTNQ08495 405 aa7.31□□□□□ -1.24
CASC19-260ENST00000641828 SCG3Q8WXD2 468 aaKnown RBP7.31□□□□□ -1.24
CASC19-260ENST00000641828 TMEM94Q12767 1356 aa7.31□□□□□ -1.24
CASC19-260ENST00000641828 RALGAPBQ86X10 1494 aa7.31□□□□□ -1.24
CASC19-260ENST00000641828 SHPRHQ149N8 1683 aa7.31□□□□□ -1.24
CASC19-260ENST00000641828 SPAG9O60271 1321 aaKnown RBP7.31□□□□□ -1.24
CASC19-260ENST00000641828 A2MP01023 1474 aa7.3□□□□□ -1.24
CASC19-260ENST00000641828 BACH1O14867 736 aa7.3□□□□□ -1.24
CASC19-260ENST00000641828 FAM13AO94988 1023 aa7.3□□□□□ -1.24
CASC19-260ENST00000641828 VARSP26640 1264 aaKnown RBP7.3□□□□□ -1.24
CASC19-260ENST00000641828 SCNN1DP51172 638 aa7.3□□□□□ -1.24
CASC19-260ENST00000641828 EAPPQ56P03 285 aaPredicted RBP7.3□□□□□ -1.24
CASC19-260ENST00000641828 CC2D2BQ6DHV5 1058 aa7.3□□□□□ -1.24
CASC19-260ENST00000641828 NGLY1Q96IV0 654 aa7.3□□□□□ -1.24
CASC19-260ENST00000641828 ATP7AQ04656 1500 aa7.3□□□□□ -1.24
CASC19-260ENST00000641828 SAMD9LQ8IVG5 1584 aa7.3□□□□□ -1.24
CASC19-260ENST00000641828 ZBTB24O43167 697 aaPredicted RBP7.3□□□□□ -1.24
CASC19-260ENST00000641828 KIF20AO95235 890 aa7.3□□□□□ -1.24
CASC19-260ENST00000641828 NPR3P17342 541 aa7.3□□□□□ -1.24
CASC19-260ENST00000641828 GDF10P55107 478 aa7.3□□□□□ -1.24
CASC19-260ENST00000641828 TNS4Q8IZW8 715 aa7.3□□□□□ -1.24
CASC19-260ENST00000641828 CGNL1Q0VF96 1302 aa7.29□□□□□ -1.24
CASC19-260ENST00000641828 WASLO00401 505 aaPredicted RBP7.29□□□□□ -1.24
CASC19-260ENST00000641828 ZNF500O60304 480 aaPredicted RBP7.29□□□□□ -1.24
CASC19-260ENST00000641828 STAU1O95793 577 aaKnown RBP7.29□□□□□ -1.24
CASC19-260ENST00000641828 RECKO95980 971 aa7.29□□□□□ -1.24
CASC19-260ENST00000641828 GTPBP4Q9BZE4 634 aaKnown RBP7.29□□□□□ -1.24
CASC19-260ENST00000641828 OSBPL3Q9H4L5 887 aa7.29□□□□□ -1.24
CASC19-260ENST00000641828 PPEF1O14829 653 aaPredicted RBP7.28□□□□□ -1.24
CASC19-260ENST00000641828 IGHDP01880 384 aa7.28□□□□□ -1.24
CASC19-260ENST00000641828 CANXP27824 592 aaKnown RBP7.28□□□□□ -1.24
CASC19-260ENST00000641828 TRIM32Q13049 653 aa7.28□□□□□ -1.24
CASC19-260ENST00000641828 PDE3AQ14432 1141 aa7.28□□□□□ -1.24
CASC19-260ENST00000641828 GAS2L3Q86XJ1 694 aa7.28□□□□□ -1.24
CASC19-260ENST00000641828 VTI1AQ96AJ9 217 aa7.28□□□□□ -1.24
CASC19-260ENST00000641828 GBP4Q96PP9 640 aa7.28□□□□□ -1.24
CASC19-260ENST00000641828 CCDC94Q9BW85 323 aaPredicted RBP7.28□□□□□ -1.24
CASC19-260ENST00000641828 CARD11Q9BXL7 1154 aa7.28□□□□□ -1.24
CASC19-260ENST00000641828 RBCK1Q9BYM8 510 aa7.28□□□□□ -1.24
CASC19-260ENST00000641828 R3HCC1Q9Y3T6 440 aaKnown RBP7.28□□□□□ -1.24
CASC19-260ENST00000641828 PLXNC1O60486 1568 aa7.28□□□□□ -1.24
CASC19-260ENST00000641828 PZPP20742 1482 aa7.28□□□□□ -1.24
CASC19-260ENST00000641828 PREX2Q70Z35 1606 aa7.28□□□□□ -1.24
CASC19-260ENST00000641828 MSH6P52701 1360 aa7.28□□□□□ -1.24
CASC19-260ENST00000641828 IBTKQ9P2D0 1353 aaPredicted RBP7.28□□□□□ -1.24
CASC19-260ENST00000641828 UQCRHLA0A096LP55 91 aa7.28□□□□□ -1.24
CASC19-260ENST00000641828 UQCRHP07919 91 aa7.28□□□□□ -1.24
CASC19-260ENST00000641828 MPSTP25325 297 aa7.28□□□□□ -1.24
CASC19-260ENST00000641828 NASPP49321 788 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms