RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 TTLL5Q6EMB2 1281 aa14.04□□□□□ -0.16
RBFOX1-224ENST00000641259 USP48Q86UV5 1035 aa14.04□□□□□ -0.16
RBFOX1-224ENST00000641259 RPAP2Q8IXW5 612 aaPredicted RBP14.04□□□□□ -0.16
RBFOX1-224ENST00000641259 DRC1Q96MC2 740 aa14.04□□□□□ -0.16
RBFOX1-224ENST00000641259 MYL6BP14649 208 aa14.03□□□□□ -0.16
RBFOX1-224ENST00000641259 ELF2Q15723 593 aa14.03□□□□□ -0.16
RBFOX1-224ENST00000641259 LRP10Q7Z4F1 713 aa14.03□□□□□ -0.16
RBFOX1-224ENST00000641259 HDAC5Q9UQL6 1122 aa14.03□□□□□ -0.16
RBFOX1-224ENST00000641259 KCPQ6ZWJ8 1503 aa14.03□□□□□ -0.16
RBFOX1-224ENST00000641259 AIMP1Q12904 312 aaKnown RBP14.03□□□□□ -0.16
RBFOX1-224ENST00000641259 DNAAF4Q8WXU2 420 aa14.03□□□□□ -0.16
RBFOX1-224ENST00000641259 MAP3K2Q9Y2U5 619 aa14.03□□□□□ -0.16
RBFOX1-224ENST00000641259 GNAI2P04899 355 aa14.03□□□□□ -0.16
RBFOX1-224ENST00000641259 HNRNPH2P55795 449 aaKnown RBP14.02□□□□□ -0.16
RBFOX1-224ENST00000641259 FERMT3Q86UX7 667 aa14.02□□□□□ -0.16
RBFOX1-224ENST00000641259 ADAMTS2O95450 1211 aa14.02□□□□□ -0.17
RBFOX1-224ENST00000641259 CWF19L2Q2TBE0 894 aaKnown RBP14.02□□□□□ -0.17
RBFOX1-224ENST00000641259 CNPY2Q9Y2B0 182 aa14.02□□□□□ -0.17
RBFOX1-224ENST00000641259 DISP2A7MBM2 1401 aa14.02□□□□□ -0.17
RBFOX1-224ENST00000641259 LAMB4A4D0S4 1761 aa14.02□□□□□ -0.17
RBFOX1-224ENST00000641259 MCCP23508 829 aa14.02□□□□□ -0.17
RBFOX1-224ENST00000641259 WNK3Q9BYP7 1800 aa14.01□□□□□ -0.17
RBFOX1-224ENST00000641259 NRAPQ86VF7 1730 aa14.01□□□□□ -0.17
RBFOX1-224ENST00000641259 FOSBP53539 338 aa14.01□□□□□ -0.17
RBFOX1-224ENST00000641259 NKX1-1Q15270 411 aaPredicted RBP14.01□□□□□ -0.17
RBFOX1-224ENST00000641259 SRCIN1Q9C0H9 1055 aa14.01□□□□□ -0.17
RBFOX1-224ENST00000641259 EXOC6BQ9Y2D4 811 aa14.01□□□□□ -0.17
RBFOX1-224ENST00000641259 ANKRD65E5RJM6 399 aa14.01□□□□□ -0.17
RBFOX1-224ENST00000641259 MYCNP04198 464 aaPredicted RBP14.01□□□□□ -0.17
RBFOX1-224ENST00000641259 NCBP1Q09161 790 aaKnown RBP14.01□□□□□ -0.17
RBFOX1-224ENST00000641259 CWC22Q9HCG8 908 aaKnown RBP14.01□□□□□ -0.17
RBFOX1-224ENST00000641259 DDX21Q9NR30 783 aaKnown RBP eCLIP14.01□□□□□ -0.17
RBFOX1-224ENST00000641259 GSPT1P15170 499 aaKnown RBP14.01□□□□□ -0.17
RBFOX1-224ENST00000641259 TERF2Q15554 542 aa14.01□□□□□ -0.17
RBFOX1-224ENST00000641259 KRBA2Q6ZNG9 492 aa14.01□□□□□ -0.17
RBFOX1-224ENST00000641259 EP400NLQ6ZTU2 488 aa14.01□□□□□ -0.17
RBFOX1-224ENST00000641259 GOLGA6L1Q8N7Z2 621 aa14.01□□□□□ -0.17
RBFOX1-224ENST00000641259 GYS2P54840 703 aa14□□□□□ -0.17
RBFOX1-224ENST00000641259 GABPB1Q06547 395 aaPredicted RBP14□□□□□ -0.17
RBFOX1-224ENST00000641259 TTC5Q8N0Z6 440 aa14□□□□□ -0.17
RBFOX1-224ENST00000641259 CCDC191Q8NCU4 936 aa14□□□□□ -0.17
RBFOX1-224ENST00000641259 PLEKHM2Q8IWE5 1019 aa14□□□□□ -0.17
RBFOX1-224ENST00000641259 AK9Q5TCS8 1911 aa14□□□□□ -0.17
RBFOX1-224ENST00000641259 GOLGA6L19H0YKK7 550 aa14□□□□□ -0.17
RBFOX1-224ENST00000641259 GNAI3P08754 354 aa13.99□□□□□ -0.17
RBFOX1-224ENST00000641259 UBTFL1P0CB47 393 aaPredicted RBP13.99□□□□□ -0.17
RBFOX1-224ENST00000641259 LMAN1P49257 510 aa13.99□□□□□ -0.17
RBFOX1-224ENST00000641259 CCDC34Q96HJ3 373 aa13.99□□□□□ -0.17
RBFOX1-224ENST00000641259 SNRPA1P09661 255 aaKnown RBP13.99□□□□□ -0.17
RBFOX1-224ENST00000641259 GPS2Q13227 327 aa13.99□□□□□ -0.17
RBFOX1-224ENST00000641259 BMP2KLQ5H9B9 411 aa13.99□□□□□ -0.17
RBFOX1-224ENST00000641259 KSR2Q6VAB6 950 aa13.99□□□□□ -0.17
RBFOX1-224ENST00000641259 FMNL2Q96PY5 1086 aa13.99□□□□□ -0.17
RBFOX1-224ENST00000641259 HYPKQ9NX55 129 aa13.99□□□□□ -0.17
RBFOX1-224ENST00000641259 BECN2A8MW95 431 aa13.99□□□□□ -0.17
RBFOX1-224ENST00000641259 REC8O95072 547 aa13.99□□□□□ -0.17
RBFOX1-224ENST00000641259 ZRSR1Q15695 479 aaKnown RBP13.99□□□□□ -0.17
RBFOX1-224ENST00000641259 E2F4Q16254 413 aa13.99□□□□□ -0.17
RBFOX1-224ENST00000641259 CEP135Q66GS9 1140 aa13.99□□□□□ -0.17
RBFOX1-224ENST00000641259 LUZP1Q86V48 1076 aa13.99□□□□□ -0.17
RBFOX1-224ENST00000641259 XAGE3Q8WTP9 111 aa13.99□□□□□ -0.17
RBFOX1-224ENST00000641259 TMX3Q96JJ7 454 aa13.99□□□□□ -0.17
RBFOX1-224ENST00000641259 SRRTQ9BXP5 876 aaKnown RBP13.99□□□□□ -0.17
RBFOX1-224ENST00000641259 ZNF215Q9UL58 517 aaPredicted RBP13.99□□□□□ -0.17
RBFOX1-224ENST00000641259 ITGB4P16144 1822 aa13.98□□□□□ -0.17
RBFOX1-224ENST00000641259 CEBPZQ03701 1054 aaKnown RBP13.98□□□□□ -0.17
RBFOX1-224ENST00000641259 RASSF4Q9H2L5 321 aa13.98□□□□□ -0.17
RBFOX1-224ENST00000641259 NRBP1Q9UHY1 535 aa13.98□□□□□ -0.17
RBFOX1-224ENST00000641259 NUTM2BA6NNL0 878 aaPredicted RBP13.98□□□□□ -0.17
RBFOX1-224ENST00000641259 NUTM2EB1AL46 878 aaPredicted RBP13.98□□□□□ -0.17
RBFOX1-224ENST00000641259 PTCD1O75127 700 aaKnown RBP13.98□□□□□ -0.17
RBFOX1-224ENST00000641259 IGKV5-2P06315 115 aa13.98□□□□□ -0.17
RBFOX1-224ENST00000641259 ATP8B2P98198 1209 aa13.98□□□□□ -0.17
RBFOX1-224ENST00000641259 PTPN14Q15678 1187 aa13.98□□□□□ -0.17
RBFOX1-224ENST00000641259 COPS6Q7L5N1 327 aa13.98□□□□□ -0.17
RBFOX1-224ENST00000641259 NUTM2AQ8IVF1 878 aaPredicted RBP13.98□□□□□ -0.17
RBFOX1-224ENST00000641259 MNS1Q8NEH6 495 aa13.98□□□□□ -0.17
RBFOX1-224ENST00000641259 TNS2Q63HR2 1409 aa13.98□□□□□ -0.17
RBFOX1-224ENST00000641259 ERVV-2B6SEH9 535 aa13.97□□□□□ -0.17
RBFOX1-224ENST00000641259 ARFGEF2Q9Y6D5 1785 aa13.97□□□□□ -0.17
RBFOX1-224ENST00000641259 NBPF26B4DH59 902 aa13.97□□□□□ -0.17
RBFOX1-224ENST00000641259 TRIM66O15016 1216 aa13.97□□□□□ -0.17
RBFOX1-224ENST00000641259 KDM4AO75164 1064 aa13.97□□□□□ -0.17
RBFOX1-224ENST00000641259 NBPF14Q5TI25 921 aa13.97□□□□□ -0.17
RBFOX1-224ENST00000641259 NBPF10Q6P3W6 841 aaKnown RBP13.97□□□□□ -0.17
RBFOX1-224ENST00000641259 NBPF15Q8N660 670 aa13.97□□□□□ -0.17
RBFOX1-224ENST00000641259 FAM184AQ8NB25 1140 aa13.97□□□□□ -0.17
RBFOX1-224ENST00000641259 SLFN14P0C7P3 912 aa13.97□□□□□ -0.17
RBFOX1-224ENST00000641259 CCDC183Q5T5S1 534 aa13.97□□□□□ -0.17
RBFOX1-224ENST00000641259 BICD2Q8TD16 824 aa13.97□□□□□ -0.17
RBFOX1-224ENST00000641259 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.97□□□□□ -0.17
RBFOX1-224ENST00000641259 SART3Q15020 963 aaKnown RBP13.96□□□□□ -0.17
RBFOX1-224ENST00000641259 PPP1R42Q7Z4L9 355 aa13.96□□□□□ -0.17
RBFOX1-224ENST00000641259 MAP4K4O95819 1239 aaPredicted RBP13.96□□□□□ -0.18
RBFOX1-224ENST00000641259 KAZALD1Q96I82 304 aa13.96□□□□□ -0.18
RBFOX1-224ENST00000641259 KIF2CQ99661 725 aa13.96□□□□□ -0.18
RBFOX1-224ENST00000641259 CTNNA3Q9UI47 895 aa13.96□□□□□ -0.18
RBFOX1-224ENST00000641259 PIGBQ92521 554 aa13.95□□□□□ -0.18
RBFOX1-224ENST00000641259 ASAP1Q9ULH1 1129 aa13.95□□□□□ -0.18
RBFOX1-224ENST00000641259 CCDC192P0DO97 292 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms