RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 MYO5BQ9ULV0 1848 aa16.12■□□□□ 0.17
SCARB2-227ENST00000640957 ZC3H13Q5T200 1668 aaKnown RBP16.12■□□□□ 0.17
SCARB2-227ENST00000640957 PSME1Q06323 249 aa16.12■□□□□ 0.17
SCARB2-227ENST00000640957 NMIQ13287 307 aaPredicted RBP16.12■□□□□ 0.17
SCARB2-227ENST00000640957 BMS1Q14692 1282 aaKnown RBP16.12■□□□□ 0.17
SCARB2-227ENST00000640957 OTUD7BQ6GQQ9 843 aa16.12■□□□□ 0.17
SCARB2-227ENST00000640957 NYAP1Q6ZVC0 841 aa16.12■□□□□ 0.17
SCARB2-227ENST00000640957 CHST3Q7LGC8 479 aa16.12■□□□□ 0.17
SCARB2-227ENST00000640957 CARD6Q9BX69 1037 aa16.12■□□□□ 0.17
SCARB2-227ENST00000640957 ME1P48163 572 aa16.11■□□□□ 0.17
SCARB2-227ENST00000640957 IQCB1Q15051 598 aa16.11■□□□□ 0.17
SCARB2-227ENST00000640957 SLFNL1Q499Z3 407 aa16.11■□□□□ 0.17
SCARB2-227ENST00000640957 E4F1Q66K89 784 aaPredicted RBP16.11■□□□□ 0.17
SCARB2-227ENST00000640957 BLOC1S2Q6QNY1 142 aa16.11■□□□□ 0.17
SCARB2-227ENST00000640957 SDF4Q9BRK5 362 aa16.11■□□□□ 0.17
SCARB2-227ENST00000640957 IFNKQ9P0W0 207 aa16.11■□□□□ 0.17
SCARB2-227ENST00000640957 VPS53Q5VIR6 699 aa16.11■□□□□ 0.17
SCARB2-227ENST00000640957 AACSQ86V21 672 aa16.11■□□□□ 0.17
SCARB2-227ENST00000640957 A0A1B0GVL5 298 aa16.11■□□□□ 0.17
SCARB2-227ENST00000640957 LMOD1P29536 600 aaPredicted RBP16.11■□□□□ 0.17
SCARB2-227ENST00000640957 CYP2C19P33261 490 aa16.11■□□□□ 0.17
SCARB2-227ENST00000640957 CCDC30Q5VVM6 783 aa16.11■□□□□ 0.17
SCARB2-227ENST00000640957 CCDC129Q6ZRS4 1044 aa16.11■□□□□ 0.17
SCARB2-227ENST00000640957 UBXN4Q92575 508 aa16.11■□□□□ 0.17
SCARB2-227ENST00000640957 DDX19AQ9NUU7 478 aaKnown RBP16.11■□□□□ 0.17
SCARB2-227ENST00000640957 A2ML1A8K2U0 1454 aa16.1■□□□□ 0.17
SCARB2-227ENST00000640957 ARHGEF28Q8N1W1 1705 aaKnown RBP16.1■□□□□ 0.17
SCARB2-227ENST00000640957 MNS1Q8NEH6 495 aa16.1■□□□□ 0.17
SCARB2-227ENST00000640957 LRRC59Q96AG4 307 aaKnown RBP16.1■□□□□ 0.17
SCARB2-227ENST00000640957 SCAND2PQ9GZW5 306 aaPredicted RBP16.1■□□□□ 0.17
SCARB2-227ENST00000640957 PLEKHA4Q9H4M7 779 aa16.1■□□□□ 0.17
SCARB2-227ENST00000640957 ZSWIM6Q9HCJ5 1215 aa16.1■□□□□ 0.17
SCARB2-227ENST00000640957 NPHP3Q7Z494 1330 aa16.1■□□□□ 0.17
SCARB2-227ENST00000640957 CCDC191Q8NCU4 936 aa16.1■□□□□ 0.17
SCARB2-227ENST00000640957 TLR7Q9NYK1 1049 aaKnown RBP16.1■□□□□ 0.17
SCARB2-227ENST00000640957 A0A0D9SFI3 127 aa16.09■□□□□ 0.17
SCARB2-227ENST00000640957 LMAN1P49257 510 aa16.09■□□□□ 0.17
SCARB2-227ENST00000640957 TEFQ10587 303 aa16.09■□□□□ 0.17
SCARB2-227ENST00000640957 TEX35Q5T0J7 233 aa16.09■□□□□ 0.17
SCARB2-227ENST00000640957 TMCO3Q6UWJ1 677 aa16.09■□□□□ 0.17
SCARB2-227ENST00000640957 PPP1R13BQ96KQ4 1090 aa16.09■□□□□ 0.17
SCARB2-227ENST00000640957 XPO4Q9C0E2 1151 aaKnown RBP16.09■□□□□ 0.17
SCARB2-227ENST00000640957 NCOA5Q9HCD5 579 aaKnown RBP16.09■□□□□ 0.17
SCARB2-227ENST00000640957 PI4KAP2A4QPH2 592 aa16.09■□□□□ 0.17
SCARB2-227ENST00000640957 PI4KAP1Q8N8J0 262 aa16.09■□□□□ 0.17
SCARB2-227ENST00000640957 CCDC171Q6TFL3 1326 aa16.09■□□□□ 0.17
SCARB2-227ENST00000640957 KIF24Q5T7B8 1368 aa16.09■□□□□ 0.17
SCARB2-227ENST00000640957 GNAT3A8MTJ3 354 aa16.09■□□□□ 0.17
SCARB2-227ENST00000640957 SLC27A2O14975 620 aa16.09■□□□□ 0.17
SCARB2-227ENST00000640957 MPRIPQ6WCQ1 1025 aa16.09■□□□□ 0.17
SCARB2-227ENST00000640957 NFATC2IPQ8NCF5 419 aa16.09■□□□□ 0.17
SCARB2-227ENST00000640957 MYO3AQ8NEV4 1616 aa16.09■□□□□ 0.17
SCARB2-227ENST00000640957 ZNF589Q86UQ0 364 aaPredicted RBP16.08■□□□□ 0.17
SCARB2-227ENST00000640957 FSD1Q9BTV5 496 aa16.08■□□□□ 0.17
SCARB2-227ENST00000640957 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.08■□□□□ 0.17
SCARB2-227ENST00000640957 MAP2P11137 1827 aaKnown RBP16.08■□□□□ 0.16
SCARB2-227ENST00000640957 OAS2P29728 719 aaKnown RBP16.08■□□□□ 0.16
SCARB2-227ENST00000640957 KIF1BPQ96EK5 621 aa16.08■□□□□ 0.16
SCARB2-227ENST00000640957 SASH3O75995 380 aa16.07■□□□□ 0.16
SCARB2-227ENST00000640957 DHX40Q8IX18 779 aaKnown RBP16.07■□□□□ 0.16
SCARB2-227ENST00000640957 CLASRPQ8N2M8 674 aaKnown RBP16.07■□□□□ 0.16
SCARB2-227ENST00000640957 FSIP1Q8NA03 581 aa16.07■□□□□ 0.16
SCARB2-227ENST00000640957 ZSCAN31Q96LW9 406 aaPredicted RBP16.07■□□□□ 0.16
SCARB2-227ENST00000640957 SH2B1Q9NRF2 756 aaPredicted RBP16.07■□□□□ 0.16
SCARB2-227ENST00000640957 PPP6R1Q9UPN7 881 aa16.07■□□□□ 0.16
SCARB2-227ENST00000640957 PHACTR2O75167 634 aa16.07■□□□□ 0.16
SCARB2-227ENST00000640957 SYCP1Q15431 976 aa16.07■□□□□ 0.16
SCARB2-227ENST00000640957 ARMCX5Q6P1M9 558 aa16.07■□□□□ 0.16
SCARB2-227ENST00000640957 GJB4Q9NTQ9 266 aa16.07■□□□□ 0.16
SCARB2-227ENST00000640957 SETD1BQ9UPS6 1966 aaKnown RBP16.07■□□□□ 0.16
SCARB2-227ENST00000640957 IFT172Q9UG01 1749 aa16.07■□□□□ 0.16
SCARB2-227ENST00000640957 HTATSF1O43719 755 aaKnown RBP16.07■□□□□ 0.16
SCARB2-227ENST00000640957 KINO60870 393 aaKnown RBP16.07■□□□□ 0.16
SCARB2-227ENST00000640957 TOB2Q14106 344 aaPredicted RBP16.07■□□□□ 0.16
SCARB2-227ENST00000640957 ZRSR1Q15695 479 aaKnown RBP16.07■□□□□ 0.16
SCARB2-227ENST00000640957 DPCR1Q3MIW9 517 aa16.07■□□□□ 0.16
SCARB2-227ENST00000640957 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.07■□□□□ 0.16
SCARB2-227ENST00000640957 POLR3DP05423 398 aaPredicted RBP16.06■□□□□ 0.16
SCARB2-227ENST00000640957 ATP1A3P13637 1013 aa16.06■□□□□ 0.16
SCARB2-227ENST00000640957 USP28Q96RU2 1077 aa16.06■□□□□ 0.16
SCARB2-227ENST00000640957 UTP14AQ9BVJ6 771 aaKnown RBP16.06■□□□□ 0.16
SCARB2-227ENST00000640957 CPS1P31327 1500 aa16.06■□□□□ 0.16
SCARB2-227ENST00000640957 ZC3H6P61129 1189 aaKnown RBP16.06■□□□□ 0.16
SCARB2-227ENST00000640957 NECTIN1Q15223 517 aa16.06■□□□□ 0.16
SCARB2-227ENST00000640957 WWC2Q6AWC2 1192 aa16.06■□□□□ 0.16
SCARB2-227ENST00000640957 CCDC73Q6ZRK6 1079 aa16.06■□□□□ 0.16
SCARB2-227ENST00000640957 NBPF11Q86T75 865 aa16.06■□□□□ 0.16
SCARB2-227ENST00000640957 SSH3Q8TE77 659 aa16.06■□□□□ 0.16
SCARB2-227ENST00000640957 C9orf78Q9NZ63 289 aaPredicted RBP16.06■□□□□ 0.16
SCARB2-227ENST00000640957 TTC21AQ8NDW8 1320 aa16.06■□□□□ 0.16
SCARB2-227ENST00000640957 PIP4K2AP48426 406 aaPredicted RBP16.06■□□□□ 0.16
SCARB2-227ENST00000640957 CWF19L2Q2TBE0 894 aaKnown RBP16.06■□□□□ 0.16
SCARB2-227ENST00000640957 RUFY2Q8WXA3 655 aa16.06■□□□□ 0.16
SCARB2-227ENST00000640957 FANCGO15287 622 aa16.05■□□□□ 0.16
SCARB2-227ENST00000640957 KCNQ3O43525 872 aa16.05■□□□□ 0.16
SCARB2-227ENST00000640957 SFPQP23246 707 aaKnown RBP eCLIP16.05■□□□□ 0.16
SCARB2-227ENST00000640957 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.05■□□□□ 0.16
SCARB2-227ENST00000640957 STX1AQ16623 288 aa16.05■□□□□ 0.16
SCARB2-227ENST00000640957 TFRCP02786 760 aaKnown RBP16.04■□□□□ 0.16
SCARB2-227ENST00000640957 PDCP20941 246 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms