RNA–Protein interactions for RNA: ENST00000640949.1

GABRD-218, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 5 BASIC

Gene GABRD, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-218ENST00000640949 PELP1Q8IZL8 1130 aaKnown RBP20.73■□□□□ 0.91
GABRD-218ENST00000640949 NLRP3Q96P20 1036 aa20.73■□□□□ 0.91
GABRD-218ENST00000640949 GNAI2P04899 355 aa20.73■□□□□ 0.91
GABRD-218ENST00000640949 CSF1RP07333 972 aa20.73■□□□□ 0.91
GABRD-218ENST00000640949 SF3B3Q15393 1217 aaKnown RBP20.73■□□□□ 0.91
GABRD-218ENST00000640949 TTLL11Q8NHH1 800 aa20.73■□□□□ 0.91
GABRD-218ENST00000640949 HSP90B1P14625 803 aaKnown RBP20.72■□□□□ 0.91
GABRD-218ENST00000640949 RABL6Q3YEC7 729 aaPredicted RBP20.72■□□□□ 0.91
GABRD-218ENST00000640949 ANKRD44Q8N8A2 993 aa20.72■□□□□ 0.91
GABRD-218ENST00000640949 CHMP4BQ9H444 224 aaKnown RBP20.72■□□□□ 0.91
GABRD-218ENST00000640949 BICC1Q9H694 974 aaKnown RBP20.72■□□□□ 0.91
GABRD-218ENST00000640949 CTSWP56202 376 aa20.71■□□□□ 0.91
GABRD-218ENST00000640949 CRY2Q49AN0 593 aa20.71■□□□□ 0.91
GABRD-218ENST00000640949 C1orf115Q9H7X2 142 aa20.71■□□□□ 0.91
GABRD-218ENST00000640949 HDAC5Q9UQL6 1122 aa20.71■□□□□ 0.91
GABRD-218ENST00000640949 GPR162Q16538 588 aa20.7■□□□□ 0.91
GABRD-218ENST00000640949 ERICH6BQ5W0A0 696 aa20.7■□□□□ 0.91
GABRD-218ENST00000640949 ZNF622Q969S3 477 aaKnown RBP eCLIP20.7■□□□□ 0.91
GABRD-218ENST00000640949 PIM2Q9P1W9 311 aa20.7■□□□□ 0.91
GABRD-218ENST00000640949 DCAF8L1A6NGE4 600 aa20.7■□□□□ 0.9
GABRD-218ENST00000640949 LMBR1LQ6UX01 489 aa20.7■□□□□ 0.9
GABRD-218ENST00000640949 PDZRN3Q9UPQ7 1066 aa20.69■□□□□ 0.9
GABRD-218ENST00000640949 KIAA1551Q9HCM1 1747 aa20.69■□□□□ 0.9
GABRD-218ENST00000640949 TAF1P21675 1872 aa20.68■□□□□ 0.9
GABRD-218ENST00000640949 SRGNP10124 158 aa20.68■□□□□ 0.9
GABRD-218ENST00000640949 CCDC85AQ96PX6 553 aaPredicted RBP20.67■□□□□ 0.9
GABRD-218ENST00000640949 GREM2Q9H772 168 aa20.67■□□□□ 0.9
GABRD-218ENST00000640949 COL11A2P13942 1736 aaPredicted RBP20.67■□□□□ 0.9
GABRD-218ENST00000640949 HOXA10P31260 410 aaPredicted RBP20.67■□□□□ 0.9
GABRD-218ENST00000640949 MTX1Q13505 466 aa20.67■□□□□ 0.9
GABRD-218ENST00000640949 BCS1LQ9Y276 419 aa20.67■□□□□ 0.9
GABRD-218ENST00000640949 ATP8B2P98198 1209 aa20.66■□□□□ 0.9
GABRD-218ENST00000640949 CCDC152Q4G0S7 254 aa20.66■□□□□ 0.9
GABRD-218ENST00000640949 DALRD3Q5D0E6 543 aaKnown RBP20.66■□□□□ 0.9
GABRD-218ENST00000640949 MASTLQ96GX5 879 aa20.66■□□□□ 0.9
GABRD-218ENST00000640949 SEC31BQ9NQW1 1179 aa20.66■□□□□ 0.9
GABRD-218ENST00000640949 PCDHB15Q9Y5E8 787 aa20.66■□□□□ 0.9
GABRD-218ENST00000640949 RTL9Q8NET4 1388 aa20.65■□□□□ 0.9
GABRD-218ENST00000640949 YBX3P16989 372 aaKnown RBP eCLIP20.65■□□□□ 0.9
GABRD-218ENST00000640949 AAMPQ13685 434 aa20.65■□□□□ 0.9
GABRD-218ENST00000640949 FAM161AQ3B820 660 aa20.65■□□□□ 0.9
GABRD-218ENST00000640949 CEP85Q6P2H3 762 aa20.65■□□□□ 0.9
GABRD-218ENST00000640949 SIRT2Q8IXJ6 389 aa20.65■□□□□ 0.9
GABRD-218ENST00000640949 TTLL6Q8N841 843 aa20.65■□□□□ 0.9
GABRD-218ENST00000640949 COL4A1P02462 1669 aa20.64■□□□□ 0.9
GABRD-218ENST00000640949 PNMA6EA0A0J9YXQ4 647 aa20.64■□□□□ 0.9
GABRD-218ENST00000640949 NPR1P16066 1061 aa20.64■□□□□ 0.9
GABRD-218ENST00000640949 RFX5P48382 616 aaPredicted RBP20.64■□□□□ 0.89
GABRD-218ENST00000640949 STYK1Q6J9G0 422 aa20.64■□□□□ 0.89
GABRD-218ENST00000640949 RPAP2Q8IXW5 612 aaPredicted RBP20.64■□□□□ 0.89
GABRD-218ENST00000640949 DLEC1Q9Y238 1755 aa20.64■□□□□ 0.89
GABRD-218ENST00000640949 ITGA6P23229 1130 aa20.63■□□□□ 0.89
GABRD-218ENST00000640949 RPGRQ92834 1020 aaKnown RBP20.63■□□□□ 0.89
GABRD-218ENST00000640949 CRAMP1Q96RY5 1269 aa20.63■□□□□ 0.89
GABRD-218ENST00000640949 CHMP3Q9Y3E7 222 aa20.63■□□□□ 0.89
GABRD-218ENST00000640949 DDX46Q7L014 1031 aaKnown RBP20.62■□□□□ 0.89
GABRD-218ENST00000640949 CNKSR1Q969H4 720 aa20.62■□□□□ 0.89
GABRD-218ENST00000640949 GOLGB1Q14789 3259 aaKnown RBP20.62■□□□□ 0.89
GABRD-218ENST00000640949 SRGAP3O43295 1099 aa20.61■□□□□ 0.89
GABRD-218ENST00000640949 ALDH1B1P30837 517 aa20.61■□□□□ 0.89
GABRD-218ENST00000640949 IFIT5Q13325 482 aaKnown RBP20.61■□□□□ 0.89
GABRD-218ENST00000640949 POLA2Q14181 598 aa20.61■□□□□ 0.89
GABRD-218ENST00000640949 SSH3Q8TE77 659 aa20.61■□□□□ 0.89
GABRD-218ENST00000640949 CELF1Q92879 486 aaKnown RBP20.61■□□□□ 0.89
GABRD-218ENST00000640949 RBM17Q96I25 401 aaKnown RBP20.61■□□□□ 0.89
GABRD-218ENST00000640949 PPP4R2Q9NY27 417 aa20.61■□□□□ 0.89
GABRD-218ENST00000640949 ZNF219Q9P2Y4 722 aaPredicted RBP20.61■□□□□ 0.89
GABRD-218ENST00000640949 BRCA1P38398 1863 aaKnown RBP20.61■□□□□ 0.89
GABRD-218ENST00000640949 GRIN3BO60391 1043 aa20.61■□□□□ 0.89
GABRD-218ENST00000640949 CCDC57Q2TAC2 916 aa20.61■□□□□ 0.89
GABRD-218ENST00000640949 ANKRD18BA2A2Z9 1011 aa20.6■□□□□ 0.89
GABRD-218ENST00000640949 PTPN12Q05209 780 aaKnown RBP20.6■□□□□ 0.89
GABRD-218ENST00000640949 ZNF594Q96JF6 807 aaPredicted RBP20.6■□□□□ 0.89
GABRD-218ENST00000640949 SLX4Q8IY92 1834 aa20.59■□□□□ 0.89
GABRD-218ENST00000640949 RPS8P62241 208 aaKnown RBP20.59■□□□□ 0.89
GABRD-218ENST00000640949 GRAPQ13588 217 aa20.59■□□□□ 0.89
GABRD-218ENST00000640949 KLHDC4Q8TBB5 520 aa20.59■□□□□ 0.89
GABRD-218ENST00000640949 GRAPLQ8TC17 118 aaPredicted RBP20.59■□□□□ 0.89
GABRD-218ENST00000640949 PRPF40BQ6NWY9 871 aaKnown RBP20.58■□□□□ 0.89
GABRD-218ENST00000640949 ARHGAP27Q6ZUM4 889 aa20.58■□□□□ 0.89
GABRD-218ENST00000640949 CACNA1SQ13698 1873 aa20.58■□□□□ 0.89
GABRD-218ENST00000640949 C21orf2O43822 256 aa20.58■□□□□ 0.88
GABRD-218ENST00000640949 CDC5LQ99459 802 aaKnown RBP20.58■□□□□ 0.88
GABRD-218ENST00000640949 COPRSQ9NQ92 184 aa20.58■□□□□ 0.88
GABRD-218ENST00000640949 BBOX1O75936 387 aa20.57■□□□□ 0.88
GABRD-218ENST00000640949 PA2G4Q9UQ80 394 aaKnown RBP20.57■□□□□ 0.88
GABRD-218ENST00000640949 SPEF2Q9C093 1822 aa20.56■□□□□ 0.88
GABRD-218ENST00000640949 UTRNP46939 3433 aa20.56■□□□□ 0.88
GABRD-218ENST00000640949 ANKRD18AQ8IVF6 992 aa20.56■□□□□ 0.88
GABRD-218ENST00000640949 B4GALNT3Q6L9W6 998 aa20.55■□□□□ 0.88
GABRD-218ENST00000640949 SLC51AQ86UW1 340 aa20.55■□□□□ 0.88
GABRD-218ENST00000640949 C7orf43Q8WVR3 580 aa20.55■□□□□ 0.88
GABRD-218ENST00000640949 PUS3Q9BZE2 481 aaKnown RBP20.55■□□□□ 0.88
GABRD-218ENST00000640949 BSDC1Q9NW68 430 aaPredicted RBP20.54■□□□□ 0.88
GABRD-218ENST00000640949 LRRC24Q50LG9 513 aa20.54■□□□□ 0.88
GABRD-218ENST00000640949 LDHAL6AQ6ZMR3 332 aa20.54■□□□□ 0.88
GABRD-218ENST00000640949 NOP58Q9Y2X3 529 aaKnown RBP20.54■□□□□ 0.88
GABRD-218ENST00000640949 RIPOR2Q9Y4F9 1068 aa20.54■□□□□ 0.88
GABRD-218ENST00000640949 HMMRO75330 724 aa20.53■□□□□ 0.88
GABRD-218ENST00000640949 IGHMBP2P38935 993 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms