RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 ZNF165P49910 485 aa16.18■□□□□ 0.18
PAX6-280ENST00000640872 DNAJC25Q9H1X3 360 aa16.18■□□□□ 0.18
PAX6-280ENST00000640872 ZNF142P52746 1687 aaPredicted RBP16.18■□□□□ 0.18
PAX6-280ENST00000640872 SETD1BQ9UPS6 1966 aaKnown RBP16.18■□□□□ 0.18
PAX6-280ENST00000640872 GIGYF1O75420 1035 aaPredicted RBP16.18■□□□□ 0.18
PAX6-280ENST00000640872 CCDC144BQ3MJ40 725 aa16.18■□□□□ 0.18
PAX6-280ENST00000640872 RNF20Q5VTR2 975 aa16.18■□□□□ 0.18
PAX6-280ENST00000640872 CCDC144CPQ8IYA2 1237 aa16.18■□□□□ 0.18
PAX6-280ENST00000640872 CLIP2Q9UDT6 1046 aa16.18■□□□□ 0.18
PAX6-280ENST00000640872 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.18■□□□□ 0.18
PAX6-280ENST00000640872 LGR6Q9HBX8 967 aa16.17■□□□□ 0.18
PAX6-280ENST00000640872 SASH1O94885 1247 aa16.16■□□□□ 0.18
PAX6-280ENST00000640872 CAVIN2O95810 425 aa16.16■□□□□ 0.18
PAX6-280ENST00000640872 PSME1Q06323 249 aa16.16■□□□□ 0.18
PAX6-280ENST00000640872 TSGA10IPQ3SY00 556 aa16.16■□□□□ 0.18
PAX6-280ENST00000640872 EAF2Q96CJ1 260 aaPredicted RBP16.16■□□□□ 0.18
PAX6-280ENST00000640872 RESTQ13127 1097 aa16.16■□□□□ 0.18
PAX6-280ENST00000640872 SARM1Q6SZW1 724 aa16.16■□□□□ 0.18
PAX6-280ENST00000640872 BICD2Q8TD16 824 aa16.16■□□□□ 0.18
PAX6-280ENST00000640872 C9orf78Q9NZ63 289 aaPredicted RBP16.16■□□□□ 0.18
PAX6-280ENST00000640872 CGNQ9P2M7 1197 aaKnown RBP16.16■□□□□ 0.18
PAX6-280ENST00000640872 CCDC112Q8NEF3 446 aa16.15■□□□□ 0.18
PAX6-280ENST00000640872 HMG20BQ9P0W2 317 aa16.15■□□□□ 0.18
PAX6-280ENST00000640872 MAP3K2Q9Y2U5 619 aa16.15■□□□□ 0.18
PAX6-280ENST00000640872 LMO7Q8WWI1 1683 aa16.15■□□□□ 0.18
PAX6-280ENST00000640872 IQCB1Q15051 598 aa16.15■□□□□ 0.18
PAX6-280ENST00000640872 TPD52L1Q16890 204 aaPredicted RBP16.15■□□□□ 0.18
PAX6-280ENST00000640872 DBF4Q9UBU7 674 aaPredicted RBP16.15■□□□□ 0.18
PAX6-280ENST00000640872 STK3Q13188 491 aa16.14■□□□□ 0.17
PAX6-280ENST00000640872 NAA30Q147X3 362 aaPredicted RBP16.14■□□□□ 0.17
PAX6-280ENST00000640872 GTF3C6Q969F1 213 aa16.14■□□□□ 0.17
PAX6-280ENST00000640872 TLR7Q9NYK1 1049 aaKnown RBP16.14■□□□□ 0.17
PAX6-280ENST00000640872 DDX41Q9UJV9 622 aaKnown RBP16.14■□□□□ 0.17
PAX6-280ENST00000640872 HDAC5Q9UQL6 1122 aa16.14■□□□□ 0.17
PAX6-280ENST00000640872 LTN1O94822 1766 aa16.14■□□□□ 0.17
PAX6-280ENST00000640872 JAK2O60674 1132 aa16.14■□□□□ 0.17
PAX6-280ENST00000640872 RBM6P78332 1123 aaKnown RBP16.14■□□□□ 0.17
PAX6-280ENST00000640872 KSR2Q6VAB6 950 aa16.14■□□□□ 0.17
PAX6-280ENST00000640872 ZNF589Q86UQ0 364 aaPredicted RBP16.14■□□□□ 0.17
PAX6-280ENST00000640872 KAZALD1Q96I82 304 aa16.14■□□□□ 0.17
PAX6-280ENST00000640872 FSD1Q9BTV5 496 aa16.14■□□□□ 0.17
PAX6-280ENST00000640872 CCDC8Q9H0W5 538 aaPredicted RBP16.14■□□□□ 0.17
PAX6-280ENST00000640872 CWF19L2Q2TBE0 894 aaKnown RBP16.13■□□□□ 0.17
PAX6-280ENST00000640872 NBPF6Q5VWK0 638 aa16.13■□□□□ 0.17
PAX6-280ENST00000640872 LRRC8AQ8IWT6 810 aa16.13■□□□□ 0.17
PAX6-280ENST00000640872 MRFAP1L1Q96HT8 127 aa16.13■□□□□ 0.17
PAX6-280ENST00000640872 NBPF4Q96M43 638 aa16.13■□□□□ 0.17
PAX6-280ENST00000640872 UTYO14607 1347 aa16.13■□□□□ 0.17
PAX6-280ENST00000640872 USPL1Q5W0Q7 1092 aa16.13■□□□□ 0.17
PAX6-280ENST00000640872 CEP135Q66GS9 1140 aa16.13■□□□□ 0.17
PAX6-280ENST00000640872 BRF1Q92994 677 aa16.13■□□□□ 0.17
PAX6-280ENST00000640872 SUCLG2Q96I99 432 aa16.13■□□□□ 0.17
PAX6-280ENST00000640872 BOLA2Q9H3K6 86 aa16.13■□□□□ 0.17
PAX6-280ENST00000640872 MRC1P22897 1456 aa16.13■□□□□ 0.17
PAX6-280ENST00000640872 BTBD11A6QL63 1104 aa16.12■□□□□ 0.17
PAX6-280ENST00000640872 PROSER3Q2NL68 480 aa16.12■□□□□ 0.17
PAX6-280ENST00000640872 MYH15Q9Y2K3 1946 aa16.12■□□□□ 0.17
PAX6-280ENST00000640872 NEMFO60524 1076 aa16.12■□□□□ 0.17
PAX6-280ENST00000640872 TAF5LO75529 589 aa16.12■□□□□ 0.17
PAX6-280ENST00000640872 GABPB1Q06547 395 aaPredicted RBP16.12■□□□□ 0.17
PAX6-280ENST00000640872 G3BP1Q13283 466 aaKnown RBP eCLIP16.12■□□□□ 0.17
PAX6-280ENST00000640872 C11orf57Q6ZUT1 292 aaPredicted RBP16.12■□□□□ 0.17
PAX6-280ENST00000640872 NYAP1Q6ZVC0 841 aa16.12■□□□□ 0.17
PAX6-280ENST00000640872 LRRC59Q96AG4 307 aaKnown RBP16.12■□□□□ 0.17
PAX6-280ENST00000640872 ZSCAN16Q9H4T2 348 aaPredicted RBP16.11■□□□□ 0.17
PAX6-280ENST00000640872 MORC2Q9Y6X9 1032 aaPredicted RBP16.11■□□□□ 0.17
PAX6-280ENST00000640872 USP27XA6NNY8 438 aa16.11■□□□□ 0.17
PAX6-280ENST00000640872 GRM8O00222 908 aa16.11■□□□□ 0.17
PAX6-280ENST00000640872 ARID5BQ14865 1188 aa16.11■□□□□ 0.17
PAX6-280ENST00000640872 LMOD2Q6P5Q4 547 aa16.11■□□□□ 0.17
PAX6-280ENST00000640872 KIF18AQ8NI77 898 aa16.11■□□□□ 0.17
PAX6-280ENST00000640872 BICC1Q9H694 974 aaKnown RBP16.11■□□□□ 0.17
PAX6-280ENST00000640872 COL15A1P39059 1388 aa16.1■□□□□ 0.17
PAX6-280ENST00000640872 GOLGA6L19H0YKK7 550 aa16.1■□□□□ 0.17
PAX6-280ENST00000640872 IGSF3O75054 1194 aa16.1■□□□□ 0.17
PAX6-280ENST00000640872 TEFQ10587 303 aa16.1■□□□□ 0.17
PAX6-280ENST00000640872 KRT32Q14532 448 aa16.1■□□□□ 0.17
PAX6-280ENST00000640872 IP6K1Q92551 441 aa16.1■□□□□ 0.17
PAX6-280ENST00000640872 CFAP45Q9UL16 551 aa16.1■□□□□ 0.17
PAX6-280ENST00000640872 ADD1P35611 737 aaKnown RBP16.09■□□□□ 0.17
PAX6-280ENST00000640872 STX1AQ16623 288 aa16.09■□□□□ 0.17
PAX6-280ENST00000640872 AKAP4Q5JQC9 854 aa16.09■□□□□ 0.17
PAX6-280ENST00000640872 LINS1Q8NG48 757 aa16.09■□□□□ 0.17
PAX6-280ENST00000640872 DDX11Q96FC9 970 aa16.09■□□□□ 0.17
PAX6-280ENST00000640872 HEG1Q9ULI3 1381 aa16.09■□□□□ 0.17
PAX6-280ENST00000640872 CTAGE5O15320 804 aa16.09■□□□□ 0.17
PAX6-280ENST00000640872 CCZ1BP86790 482 aa16.08■□□□□ 0.17
PAX6-280ENST00000640872 CCZ1P86791 482 aaPredicted RBP16.08■□□□□ 0.17
PAX6-280ENST00000640872 SMARCC2Q8TAQ2 1214 aa16.08■□□□□ 0.17
PAX6-280ENST00000640872 ZNF592Q92610 1267 aa16.08■□□□□ 0.17
PAX6-280ENST00000640872 NEK1Q96PY6 1258 aa16.08■□□□□ 0.17
PAX6-280ENST00000640872 NFAT5O94916 1531 aa16.08■□□□□ 0.16
PAX6-280ENST00000640872 H3BQV1 296 aa16.08■□□□□ 0.16
PAX6-280ENST00000640872 IFFO2Q5TF58 517 aa16.08■□□□□ 0.16
PAX6-280ENST00000640872 KCND1Q9NSA2 647 aa16.08■□□□□ 0.16
PAX6-280ENST00000640872 NCAPD2Q15021 1401 aa16.08■□□□□ 0.16
PAX6-280ENST00000640872 SKILP12757 684 aa16.07■□□□□ 0.16
PAX6-280ENST00000640872 PTPN14Q15678 1187 aa16.07■□□□□ 0.16
PAX6-280ENST00000640872 Q6ZUG5 572 aa16.07■□□□□ 0.16
PAX6-280ENST00000640872 PROSER2Q86WR7 435 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms